RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SURF2Q15527 256 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-205ENST00000503401 SP6Q3SY56 376 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 ADAD2Q8NCV1 583 aaKnown RBP12.94□□□□□ -0.34
SCLT1-205ENST00000503401 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 OR4X2Q8NGF9 303 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 C3orf85A0A1B0GTC6 90 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 KRASP01116 189 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 MYOD1P15172 320 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 CCR6P51684 374 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 SGMS2Q8NHU3 365 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 VSTM2AQ8TAG5 236 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
SCLT1-205ENST00000503401 MARCH11A6NNE9 402 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 H0Y980 276 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 OPN1MWP04001 364 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 SERPINE2P07093 398 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 OPN1MW2P0DN77 364 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 OPN1MW3P0DN78 364 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 MMD2Q8IY49 270 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 TCTEX1D1Q8N7M0 179 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 CASTOR1Q8WTX7 329 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 DEDD2Q8WXF8 326 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 TMEM230Q96A57 120 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 GON7Q9BXV9 100 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 WDR12Q9GZL7 423 aaKnown RBP12.92□□□□□ -0.34
SCLT1-205ENST00000503401 NUBP2Q9Y5Y2 271 aa12.92□□□□□ -0.34
SCLT1-205ENST00000503401 TEX13DA0A0J9YY54 714 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-205ENST00000503401 A0A1W2PN81 502 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 TCRBV4S1A1TA0A5B7 111 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 ACTL6BO94805 426 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 OR5AC1P0C628 307 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 CD40LGP29965 261 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
SCLT1-205ENST00000503401 CHRNA7P36544 502 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 ERVK-16P61578 105 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 CD83Q01151 205 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 ZNF846Q147U1 533 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 C19orf54Q5BKX5 351 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 SRSF12Q8WXF0 261 aaKnown RBP12.91□□□□□ -0.34
SCLT1-205ENST00000503401 AIFM2Q9BRQ8 373 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 CCDC32Q9BV29 185 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 BET1LQ9NYM9 111 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 ZNF580Q9UK33 172 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 PLA2G10O15496 165 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 SOX15O60248 233 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 AKR1C4P17516 323 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 BTCP35070 178 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-205ENST00000503401 SCGB3A2Q96PL1 93 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 PHB2Q99623 299 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 FAM212BQ9NTI7 297 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-205ENST00000503401 NSG2Q9Y328 171 aa12.91□□□□□ -0.34
SCLT1-205ENST00000503401 MSGN1A6NI15 193 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 E7EUB6 86 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 UPK2O00526 184 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
SCLT1-205ENST00000503401 IGHG4P01861 327 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 RPLP1P05386 114 aaKnown RBP12.9□□□□□ -0.34
SCLT1-205ENST00000503401 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
SCLT1-205ENST00000503401 RPL8P62917 257 aaKnown RBP12.9□□□□□ -0.34
SCLT1-205ENST00000503401 TMEM267Q0VDI3 215 aaPredicted RBP12.9□□□□□ -0.34
SCLT1-205ENST00000503401 TRIM16LQ309B1 348 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 MINDY2Q8NBR6 621 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 PRR13Q9NZ81 148 aa12.9□□□□□ -0.34
SCLT1-205ENST00000503401 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 HLA-GP17693 338 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
SCLT1-205ENST00000503401 FYTTD1Q96QD9 318 aaKnown RBP12.89□□□□□ -0.35
SCLT1-205ENST00000503401 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-205ENST00000503401 A0A1B0GW64 132 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 CENPXA8MT69 81 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 TSPAN15O95858 294 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 IGLV1-40P01703 118 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 PF4V1P10720 104 aa12.88□□□□□ -0.35
SCLT1-205ENST00000503401 UCP1P25874 307 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms