RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 C5orf66Q9H5L9 145 aa19.68■□□□□ 0.74
LSM6-202ENST00000502781 CREBL2O60519 120 aaPredicted RBP19.67■□□□□ 0.74
LSM6-202ENST00000502781 ELANEP08246 267 aa19.67■□□□□ 0.74
LSM6-202ENST00000502781 FOXE3Q13461 319 aa19.67■□□□□ 0.74
LSM6-202ENST00000502781 OR4A47Q6IF82 309 aa19.67■□□□□ 0.74
LSM6-202ENST00000502781 M0QZ24 198 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 IGLV1-40P01703 118 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 OPN1MWP04001 364 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 OPN1MW2P0DN77 364 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 OPN1MW3P0DN78 364 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 PSMB8P28062 276 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 TMEM267Q0VDI3 215 aaPredicted RBP19.66■□□□□ 0.74
LSM6-202ENST00000502781 PRR31Q5SQ13 230 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 TRIQKQ629K1 86 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 SSX9Q7RTT3 188 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 CCDC71LQ8N9Z2 235 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 OR4A5Q8NH83 315 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 R3HDM4Q96D70 268 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 COPZ2Q9P299 210 aa19.66■□□□□ 0.74
LSM6-202ENST00000502781 TET2Q6N021 2002 aaPredicted RBP19.65■□□□□ 0.74
LSM6-202ENST00000502781 TCRBV4S1A1TA0A5B7 111 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 MARCH11A6NNE9 402 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 H0Y980 276 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 CNIH1O95406 144 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 IL7P13232 177 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 GNB1P62873 340 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 TNXAQ16473 311 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 ECSCRQ19T08 205 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 ZNF57Q68EA5 555 aaPredicted RBP19.65■□□□□ 0.74
LSM6-202ENST00000502781 LFNGQ8NES3 379 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 GRPEL2Q8TAA5 225 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 ABHD5Q8WTS1 349 aa19.65■□□□□ 0.74
LSM6-202ENST00000502781 C14orf166Q9Y224 244 aaKnown RBP19.65■□□□□ 0.74
LSM6-202ENST00000502781 TSSC4Q9Y5U2 329 aaPredicted RBP19.65■□□□□ 0.74
LSM6-202ENST00000502781 SOX15O60248 233 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 IGKV1-39P01597 117 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 IGKV1D-39P04432 117 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 FGF2P09038 288 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 C2orf68Q2NKX9 166 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 SRSF12Q8WXF0 261 aaKnown RBP19.64■□□□□ 0.73
LSM6-202ENST00000502781 SCGB3A2Q96PL1 93 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 TP53RKQ96S44 253 aa19.64■□□□□ 0.73
LSM6-202ENST00000502781 C3orf85A0A1B0GTC6 90 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 MAS1LP35410 378 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 ASPHD1Q5U4P2 390 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 UNQ5815/PRO19632Q6UWF5 114 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 MYOZ3Q8TDC0 251 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 S100ZQ8WXG8 99 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 TMEM68Q96MH6 324 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 ZFP57Q9NU63 452 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 TMEM140Q9NV12 185 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 FOXA2Q9Y261 457 aaPredicted RBP19.63■□□□□ 0.73
LSM6-202ENST00000502781 VSIG4Q9Y279 399 aa19.63■□□□□ 0.73
LSM6-202ENST00000502781 UPK2O00526 184 aa19.62■□□□□ 0.73
LSM6-202ENST00000502781 B3GALNT1O75752 331 aa19.62■□□□□ 0.73
LSM6-202ENST00000502781 RPA2P15927 270 aa19.62■□□□□ 0.73
LSM6-202ENST00000502781 RPL8P62917 257 aaKnown RBP19.62■□□□□ 0.73
LSM6-202ENST00000502781 CXorf66Q5JRM2 361 aaPredicted RBP19.62■□□□□ 0.73
LSM6-202ENST00000502781 DMBX1Q8NFW5 382 aa19.62■□□□□ 0.73
LSM6-202ENST00000502781 ACTL6BO94805 426 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 KRASP01116 189 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 RPLP1P05386 114 aaKnown RBP19.61■□□□□ 0.73
LSM6-202ENST00000502781 RPL23AP62750 156 aaKnown RBP19.61■□□□□ 0.73
LSM6-202ENST00000502781 NSUN5P1Q3KNT7 163 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 C10orf55Q5SWW7 151 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 OR5M8Q8NGP6 311 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 TMEM230Q96A57 120 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 SEC22AQ96IW7 307 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 CCDC32Q9BV29 185 aa19.61■□□□□ 0.73
LSM6-202ENST00000502781 TRAV3A0A0B4J244 114 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 A0A1W2PN81 502 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 NAP1L6A6NFF2 107 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 MSGN1A6NI15 193 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 TSPAN15O95858 294 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 SERPINE2P07093 398 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 UCP1P25874 307 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 G6PCP35575 357 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 CHRNA7P36544 502 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 INPP1P49441 399 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 ERVK-16P61578 105 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 KIAA0141Q14154 515 aaPredicted RBP19.6■□□□□ 0.73
LSM6-202ENST00000502781 LCNL1Q6ZST4 164 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 SLC25A21Q9BQT8 299 aaPredicted RBP19.6■□□□□ 0.73
LSM6-202ENST00000502781 KLK15Q9H2R5 256 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 NAA60Q9H7X0 242 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 MGAM2Q2M2H8 2515 aa19.6■□□□□ 0.73
LSM6-202ENST00000502781 CRYM-AS1A6NIL9 109 aa19.59■□□□□ 0.73
LSM6-202ENST00000502781 HLA-GP17693 338 aa19.59■□□□□ 0.73
LSM6-202ENST00000502781 SPIN2AQ99865 258 aa19.59■□□□□ 0.73
LSM6-202ENST00000502781 SPIN2BQ9BPZ2 258 aa19.59■□□□□ 0.73
LSM6-202ENST00000502781 C7orf50Q9BRJ6 194 aaKnown RBP19.59■□□□□ 0.73
LSM6-202ENST00000502781 A0A1B0GW64 132 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 E7EUB6 86 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 CD40LGP29965 261 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 SP6Q3SY56 376 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 GLYATL2Q8WU03 294 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 TMEM222Q9H0R3 208 aa19.58■□□□□ 0.73
LSM6-202ENST00000502781 VWFP04275 2813 aa19.58■□□□□ 0.72
LSM6-202ENST00000502781 A0A1W2PRX2 142 aa19.57■□□□□ 0.72
LSM6-202ENST00000502781 TEX22C9J3V5 150 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms