RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RRNAD1Q96FB5 475 aaKnown RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 SEC22AQ96IW7 307 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 OR2A7Q96R45 310 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 PHB2Q99623 299 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 HSPB9Q9BQS6 159 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 ALX4Q9H161 411 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 SIGLEC9Q9Y336 463 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 C2CD3Q4AC94 2353 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 A0A0B4J293 547 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 RBMXL2O75526 392 aaKnown RBP10.77□□□□□ -0.69
CPNE1-227ENST00000498056 ACTL6BO94805 426 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 DUS4LO95620 317 aaKnown RBP10.77□□□□□ -0.69
CPNE1-227ENST00000498056 HLA-DRB1P01911 266 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 AMY1AP04745 511 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 OR9G9P0C7N8 305 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 RAG2P55895 527 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 RPL15P61313 204 aaKnown RBP10.77□□□□□ -0.69
CPNE1-227ENST00000498056 OXA1LQ15070 435 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 POU2AF1Q16633 256 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 IZUMO4Q1ZYL8 232 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TEX45Q8NA69 505 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 GRPEL2Q8TAA5 225 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TMEM167AQ8TBQ9 72 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TMEM56Q96MV1 263 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 PRSS22Q9GZN4 317 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 RANBP3Q9H6Z4 567 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-227ENST00000498056 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-227ENST00000498056 ZNF702PQ9H963 129 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 PARP11Q9NR21 331 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 TMEM56-RWDD3S4R434 201 aa10.77□□□□□ -0.69
CPNE1-227ENST00000498056 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.69
CPNE1-227ENST00000498056 TRAV3A0A0B4J244 114 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 A0A0B4J2A0 478 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 PIGBOS1A0A0B4J2F0 54 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 A0A0G2JRQ6 117 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 IL5P05113 134 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 CRYGBP07316 175 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 HOXB5P09067 269 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 BLCAPP62952 87 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 PJVKQ0ZLH3 352 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 PRSS8Q16651 343 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 OR4A5Q8NH83 315 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 CHPT1Q8WUD6 406 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 MITD1Q8WV92 249 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 SHPKQ9UHJ6 478 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 NSG2Q9Y328 171 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 MMP24Q9Y5R2 645 aa10.76□□□□□ -0.69
CPNE1-227ENST00000498056 C15orf61A6NNL5 157 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 UPK2O00526 184 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 CCSO14618 274 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 ADAP1O75689 374 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 SNAPC5O75971 98 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 NXPH3O95157 252 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 CNIH1O95406 144 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 VDAC1P21796 283 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 VDAC2P45880 294 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-227ENST00000498056 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
CPNE1-227ENST00000498056 NDPQ00604 133 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 C10orf55Q5SWW7 151 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 Q6ZSV7 163 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 SLC35E3Q7Z769 313 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 FAM219AQ8IW50 185 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 C12orf45Q8N5I9 185 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-227ENST00000498056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-227ENST00000498056 LRTM2Q8N967 370 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 OR4A16Q8NH70 328 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 OR2T6Q8NHC8 308 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 ARPC1AQ92747 370 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 CACNG5Q9UF02 275 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 ALG5Q9Y673 324 aa10.75□□□□□ -0.69
CPNE1-227ENST00000498056 IGHV7-81A0A0B4J1V7 117 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 FCN1O00602 326 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 ATP6V0E1O15342 81 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 KCNAB3O43448 404 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 SSNA1O43805 119 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 OPN1MWP04001 364 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 OPN1MW2P0DN77 364 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 OPN1MW3P0DN78 364 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 MYOD1P15172 320 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 HLA-GP17693 338 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 RELBQ01201 579 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 ECSCRQ19T08 205 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
CPNE1-227ENST00000498056 Q6ZS46 218 aa10.74□□□□□ -0.69
CPNE1-227ENST00000498056 FAM103A1Q9BTL3 118 aaKnown RBP10.74□□□□□ -0.69
CPNE1-227ENST00000498056 SETD2Q9BYW2 2564 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-227ENST00000498056 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 FAM25EA8MYX2 175 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 IFNA21P01568 189 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 P0C879 139 aa10.73□□□□□ -0.69
CPNE1-227ENST00000498056 SULT1A3P0DMM9 295 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms