RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HLA-DRB1P01911 266 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 H2AFB2P0C5Z0 115 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 ANXA7P20073 488 aaKnown RBP15.86■□□□□ 0.13
CTSD-206ENST00000497544 G6PCP35575 357 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 FOXL1Q12952 345 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 DCTN2Q13561 401 aaKnown RBP15.86■□□□□ 0.13
CTSD-206ENST00000497544 POU2AF1Q16633 256 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 NRARPQ7Z6K4 114 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 ZNF695Q8IW36 515 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 Q8N2B8 174 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 DUSP18Q8NEJ0 188 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 BEX1Q9HBH7 125 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 NUDT15Q9NV35 164 aa15.86■□□□□ 0.13
CTSD-206ENST00000497544 MARCH11A6NNE9 402 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 CREBL2O60519 120 aaPredicted RBP15.85■□□□□ 0.13
CTSD-206ENST00000497544 CDS2O95674 445 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 IGHG2P01859 326 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 SUPT4H1P63272 117 aaKnown RBP15.85■□□□□ 0.13
CTSD-206ENST00000497544 TMEM187Q14656 261 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 C4orf46Q504U0 113 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 SLC35E3Q7Z769 313 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 PUSL1Q8N0Z8 303 aaKnown RBP15.85■□□□□ 0.13
CTSD-206ENST00000497544 OR4A5Q8NH83 315 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 ALX4Q9H161 411 aaPredicted RBP15.85■□□□□ 0.13
CTSD-206ENST00000497544 TPSG1Q9NRR2 321 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 BET1LQ9NYM9 111 aa15.85■□□□□ 0.13
CTSD-206ENST00000497544 A0A1B0GUS0 222 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 ACTL6BO94805 426 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 KBTBD11O94819 623 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 CNIH1O95406 144 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 SFT2D2O95562 160 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 CA2P00918 260 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 IGKV1-39P01597 117 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 IGKV1D-39P04432 117 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 OR4E1P0C645 316 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 VDAC2P45880 294 aaPredicted RBP15.84■□□□□ 0.13
CTSD-206ENST00000497544 CX3CL1P78423 397 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 PPP1R1AQ13522 171 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 OR4A47Q6IF82 309 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 PLET1Q6UQ28 207 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 ZNF562Q6V9R5 426 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 H2BFWTQ7Z2G1 175 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 MMD2Q8IY49 270 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 TMEM167AQ8TBQ9 72 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 CASTOR1Q8WTX7 329 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 HSPB9Q9BQS6 159 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 TMEM140Q9NV12 185 aa15.84■□□□□ 0.13
CTSD-206ENST00000497544 IGHV7-81A0A0B4J1V7 117 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 TMEM89A2RUT3 159 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 CLPSL1A2RUU4 121 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 SNAPC5O75971 98 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 AKR1C2P52895 323 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 RAB25P57735 213 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 GNB1P62873 340 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 SRPXP78539 464 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 PJVKQ0ZLH3 352 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 PRSS8Q16651 343 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 TMEM268Q5VZI3 342 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 FOXRED2Q8IWF2 684 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 SELENOHQ8IZQ5 122 aaKnown RBP15.83■□□□□ 0.12
CTSD-206ENST00000497544 LGI3Q8N145 548 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 LINC01006Q8NI28 216 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 RNASE11Q8TAA1 199 aaKnown RBP15.83■□□□□ 0.12
CTSD-206ENST00000497544 RBPMSQ93062 196 aaKnown RBP15.83■□□□□ 0.12
CTSD-206ENST00000497544 RRNAD1Q96FB5 475 aaKnown RBP15.83■□□□□ 0.12
CTSD-206ENST00000497544 SEC22AQ96IW7 307 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 OR51J1Q9H342 316 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 ZNF430Q9H8G1 570 aaPredicted RBP15.83■□□□□ 0.12
CTSD-206ENST00000497544 PRR13Q9NZ81 148 aa15.83■□□□□ 0.12
CTSD-206ENST00000497544 PIGBOS1A0A0B4J2F0 54 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 C9orf170A2RU37 121 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 LINC01548A6NM66 108 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 UPK2O00526 184 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 MDKP21741 143 aaPredicted RBP15.82■□□□□ 0.12
CTSD-206ENST00000497544 FXYD3Q14802 87 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 TNXAQ16473 311 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 LYG2Q86SG7 212 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 CADM3Q8N126 398 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 ABHD5Q8WTS1 349 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 IL22RA2Q969J5 263 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 TMEM56Q96MV1 263 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 RNF114Q9Y508 228 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 TMEM56-RWDD3S4R434 201 aa15.82■□□□□ 0.12
CTSD-206ENST00000497544 HLA-AP01891 365 aaKnown RBP15.81■□□□□ 0.12
CTSD-206ENST00000497544 RPL8P62917 257 aaKnown RBP15.81■□□□□ 0.12
CTSD-206ENST00000497544 LHFPL5Q8TAF8 219 aa15.81■□□□□ 0.12
CTSD-206ENST00000497544 PARP11Q9NR21 331 aa15.81■□□□□ 0.12
CTSD-206ENST00000497544 SERTAD4Q9NUC0 356 aa15.81■□□□□ 0.12
CTSD-206ENST00000497544 TRAV3A0A0B4J244 114 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 AP4M1O00189 453 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 IL6RP08887 468 aaPredicted RBP15.8■□□□□ 0.12
CTSD-206ENST00000497544 MAS1LP35410 378 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 DHRS2Q13268 280 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 MRGPRG-AS1Q2M3A8 158 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 TMEM95Q3KNT9 176 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 COQ8AQ8NI60 647 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 LINC00527Q9UJ94 153 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 MMP24Q9Y5R2 645 aa15.8■□□□□ 0.12
CTSD-206ENST00000497544 INMT-MINDY4F8WBC2 141 aa15.79■□□□□ 0.12
CTSD-206ENST00000497544 ATP6V0E1O15342 81 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms