RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 Q6ZPA2 131 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 Q6ZRM9 215 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 MTURNQ8N3F0 131 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 C5orf17Q8NAS9 161 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 ST6GALNAC3Q8NDV1 305 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 SARAFQ96BY9 339 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 ZNF48Q96MX3 618 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 EMC6Q9BV81 110 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 HRASLS2Q9NWW9 162 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 COL5A1P20908 1838 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 TRGV10A0A0A0MS01 117 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 TRAV8-6A0A0B4J262 113 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 IGKV1D-13A0A0B4J2D9 117 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 SPRY1O43609 319 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 TLX3O43711 291 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 VAMP5O95183 116 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 IGKV1-13P0DP09 117 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 KLF5Q13887 457 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 PIGYQ3MUY2 71 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 SPTSSAQ969W0 71 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 DERL1Q9BUN8 251 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 GP6Q9HCN6 339 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 ATP23Q9Y6H3 246 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 V9GYV3 84 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 CACNA1AO00555 2505 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 DOCK11Q5JSL3 2073 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MUC21A0A0G2JKD1 596 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MUC21A0A140T8X8 626 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 BMPR1BO00238 502 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 HSBP1O75506 76 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 PPIAL4GP0DN37 164 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 SRIP30626 198 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 FUT6P51993 359 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 FBXW4P57775 412 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MLF1P58340 268 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MFAP5Q13361 173 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MUC21Q5SSG8 566 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 TMEM42Q69YG0 159 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 OR5A1Q8NGJ0 315 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 SIGMAR1Q99720 223 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 TMEM70Q9BUB7 260 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 OSTCQ9NRP0 149 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 PNO1Q9NRX1 252 aaKnown RBP7.61□□□□□ -1.19
HPS4-217ENST00000496385 A0A1W2PPV4 95 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 C2orf70A6NJV1 201 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 CRYAAP02489 173 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 CDAP32320 146 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 PMP22Q01453 160 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 ATOH7Q8N100 152 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 OR1K1Q8NGR3 316 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 WIPF2Q8TF74 440 aaPredicted RBP7.61□□□□□ -1.19
HPS4-217ENST00000496385 ABI3Q9P2A4 366 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 OR2W1Q9Y3N9 320 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 MYO7BQ6PIF6 2116 aa7.61□□□□□ -1.19
HPS4-217ENST00000496385 IGKV1-27A0A075B6S5 117 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 H0YIG0 161 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 M0R135 149 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 DUX1O43812 170 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 PRKNO60260 465 aaPredicted RBP7.6□□□□□ -1.19
HPS4-217ENST00000496385 MPDU1O75352 247 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 PSG2P11465 335 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 RELBQ01201 579 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 TLE1Q04724 770 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 DMRTC1Q5HYR2 192 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 FOXL2NBQ6ZUU3 175 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 WFDC8Q8IUA0 241 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 PRR22Q8IZ63 422 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 OR8I2Q8N0Y5 310 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 OR10W1Q8NGF6 305 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 ZNF799Q96GE5 643 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 LOC102724200A0A096LPH7 203 aaPredicted RBP7.6□□□□□ -1.19
HPS4-217ENST00000496385 TRBV6-6A0A0A6YYG2 114 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 IGKV1-12A0A0C4DH73 117 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 IGHV5-10-1A0A0J9YXX1 117 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 PGPEP1LA6NFU8 196 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 F5H5K5 113 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 H3BRM9 83 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 CXorf1O96002 111 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 MT-CO3P00414 261 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 APCSP02743 223 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 NTF3P20783 257 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 C17orf67Q0P5P2 114 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 Q56UQ5 140 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 LCN12Q6JVE5 192 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 EBLN2Q6P2I7 272 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 BRICD5Q6PL45 260 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 OR1N2Q8NGR9 330 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
HPS4-217ENST00000496385 OXGR1Q96P68 337 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 SCNM1Q9BWG6 230 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 LIN7CQ9NUP9 197 aaKnown RBP7.6□□□□□ -1.19
HPS4-217ENST00000496385 PTPRBP23467 1997 aa7.6□□□□□ -1.19
HPS4-217ENST00000496385 IGF2RP11717 2491 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms