RNA–Protein interactions for RNA: ENST00000495058.5

PPP4R1L-208, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), human

TSL 1 (best)

Gene PPP4R1L, Length 3,593 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1L-208	ENST00000495058	ATP5S	Q99766	215 aa		6.09	□□□□□ -1.43
PPP4R1L-208	ENST00000495058	EGLN1	Q9GZT9	426 aa		6.09	□□□□□ -1.43
PPP4R1L-208	ENST00000495058	COL12A1	Q99715	3063 aa		6.09	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	OR4A8	P0C604	315 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SEC11B	P0C7V7	166 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	PAX1	P15863	534 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	COX5A	P20674	150 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SULT1A1	P50225	295 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	PTTG1IP	P53801	180 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	OR5I1	Q13606	314 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	TIMM23B	Q5SRD1	257 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ZNF787	Q6DD87	383 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058		Q6ZS92	163 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RAB40C	Q96S21	281 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ATP6V0B	Q99437	205 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ENY2	Q9NPA8	101 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SLC39A9	Q9NUM3	307 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MMP24	Q9Y5R2	645 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	FAM208B	Q5VWN6	2430 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MAP1A	P78559	2803 aa	Predicted RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MALRD1	Q5VYJ5	2156 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ZFYVE26	Q68DK2	2539 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	TRGV10	A0A0A0MS01	117 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058		A0A1B0GU03	582 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	DANCR	P0C864	163 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	FGF7	P21781	194 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	CD40	P25942	277 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	CDX1	P47902	265 aa	Predicted RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RPS23	P62266	143 aa	Known RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RPL19	P84098	196 aa	Known RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	KIAA0141	Q14154	515 aa	Predicted RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LY6D	Q14210	128 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	GCSAM	Q8N6F7	178 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ZNF645	Q8N7E2	425 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LRTM2	Q8N967	370 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	OR10P1	Q8NGE3	313 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LHX4	Q969G2	390 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SAP30L	Q9HAJ7	183 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	STRAP	Q9Y3F4	350 aa	Known RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	KPTN	Q9Y664	436 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	PITX3	O75364	302 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	IGKV1-39	P01597	117 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	IGKV1D-39	P04432	117 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	APELA	P0DMC3	54 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SNCA	P37840	140 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	BSPH1	Q075Z2	132 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	IGFL2	Q6UWQ7	119 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	FAM24B	Q8N5W8	94 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RPUSD4	Q96CM3	377 aa	Known RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SCRT1	Q9BWW7	348 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RBKS	Q9H477	322 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ZNF665	Q9H7R5	613 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RNF7	Q9UBF6	113 aa		6.08	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SPEN	Q96T58	3664 aa	Known RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	TNC	P24821	2201 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	IGKV1D-17	A0A075B6S4	117 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	PGPEP1L	A6NFU8	196 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ENSA	O43768	121 aa	Known RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MT-ND4L	P03901	98 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	NBEAP1	P0C6P0	100 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	HOXA5	P20719	270 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ERVK11-1	P61568	191 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	DOLPP1	Q86YN1	238 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	OR1L6	Q8NGR2	347 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LYPD6B	Q8NI32	183 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ANAPC16	Q96DE5	110 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	OR4C12	Q96R67	309 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	TMUB1	Q9BVT8	246 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	VSIR	Q9H7M9	311 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SMG1	Q96Q15	3661 aa	Known RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MBD3L3	A6NE82	208 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MBD3L5	A6NJ08	208 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	NKX6-3	A6NJ46	265 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LINC00473	A8K010	186 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	GLRX	P35754	106 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ID3	Q02535	119 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	ZNF585B	Q52M93	769 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	CST9LP1	Q5W188	147 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	IGFL3	Q6UXB1	125 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	C11orf53	Q8IXP5	236 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	CYB561D1	Q8N8Q1	229 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LINC01560	Q8TB33	94 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	FAM57A	Q8TBR7	257 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	WFIKKN1	Q96NZ8	548 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	SPX	Q9BT56	116 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	HIF1AN	Q9NWT6	349 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	NAGK	Q9UJ70	344 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	WSB1	Q9Y6I7	421 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058		A0A0G2JNJ9	132 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	LRRC30	A6NM36	301 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058		K7EP13	123 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	MGST3	O14880	152 aa		6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RPS10	P46783	165 aa	Known RBP	6.07	□□□□□ -1.44
PPP4R1L-208	ENST00000495058	RND3	P61587	244 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms