RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 GID8Q9NWU2 228 aa2.47□□□□□ -2.01
SRRM1-218ENST00000494934 TXNL4BQ9NX01 149 aaKnown RBP2.47□□□□□ -2.01
SRRM1-218ENST00000494934 CCL26Q9Y258 94 aa2.47□□□□□ -2.01
SRRM1-218ENST00000494934 MMACHCQ9Y4U1 282 aa2.47□□□□□ -2.01
SRRM1-218ENST00000494934 EIF3AQ14152 1382 aaKnown RBP2.47□□□□□ -2.01
SRRM1-218ENST00000494934 RALGAPA2Q2PPJ7 1873 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 C9JCJ5 164 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 COX7A2LO14548 114 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 IGHV1-69P01742 117 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 TCRBP04435 133 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 GZMBP10144 247 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 BLVRBP30043 206 aaPredicted RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 ALDH3A1P30838 453 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 GABRA4P48169 554 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 ERVS71-1P61550 626 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 TNFAIP6P98066 277 aaPredicted RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 HOXC5Q00444 222 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 HACD4Q5VWC8 232 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 TMPPEQ6ZT21 453 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 TMEM86BQ8N661 226 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 PXT1Q8NFP0 134 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 NEK7Q8TDX7 302 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 C12orf43Q96C57 262 aaKnown RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 DGCR14Q96DF8 476 aaKnown RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 DIRAS2Q96HU8 199 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 TAS2R7Q9NYW3 318 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 KLK5Q9Y337 293 aaPredicted RBP2.46□□□□□ -2.02
SRRM1-218ENST00000494934 PTPRBP23467 1997 aa2.46□□□□□ -2.02
SRRM1-218ENST00000494934 A0A087WUU8 490 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 TMEM238C9JI98 176 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 KPNA3O00505 521 aaPredicted RBP2.45□□□□□ -2.02
SRRM1-218ENST00000494934 UBE2L6O14933 153 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 FADS1O60427 444 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 RAB5BP61020 215 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 LSM6P62312 80 aaKnown RBP2.45□□□□□ -2.02
SRRM1-218ENST00000494934 BTN3A2P78410 334 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 KRR1Q13601 381 aaKnown RBP2.45□□□□□ -2.02
SRRM1-218ENST00000494934 OR2F1Q13607 317 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 SMCO1Q147U7 214 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.45□□□□□ -2.02
SRRM1-218ENST00000494934 HIST2H3PS2Q5TEC6 136 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 ZHX1-C8orf76Q96EF9 292 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 PRAP1Q96NZ9 151 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 NMNAT3Q96T66 252 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 NIPSNAP1Q9BPW8 284 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 MND1Q9BWT6 205 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 OR51I2Q9H344 312 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 SPANXA1Q9NS26 97 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 VPS29Q9UBQ0 182 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 ICE1Q9Y2F5 2266 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 KIF24Q5T7B8 1368 aa2.45□□□□□ -2.02
SRRM1-218ENST00000494934 PEG3Q9GZU2 1588 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 MALRD1Q5VYJ5 2156 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 NCKAP5O14513 1909 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 ZFYVE9O95405 1425 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 INMT-MINDY4F8WBC2 141 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 H3BPC8 53 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 PFDN1O60925 122 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 IFI30P13284 250 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 MARCKSL1P49006 195 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 GZMMP51124 257 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 GTF2A1P52655 376 aaPredicted RBP2.44□□□□□ -2.02
SRRM1-218ENST00000494934 ZNF140P52738 457 aaPredicted RBP2.44□□□□□ -2.02
SRRM1-218ENST00000494934 RBM11P57052 281 aaKnown RBP2.44□□□□□ -2.02
SRRM1-218ENST00000494934 TBPL1P62380 186 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 TFAMQ00059 246 aaKnown RBP2.44□□□□□ -2.02
SRRM1-218ENST00000494934 EDDM3AQ14507 147 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 BATFQ16520 125 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 DEFB125Q8N687 156 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 RASSF5Q8WWW0 418 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 FGF13Q92913 245 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 AIF1LQ9BQI0 150 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 TTTY13Q9BZ97 58 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 NMNAT1Q9HAN9 279 aaPredicted RBP2.44□□□□□ -2.02
SRRM1-218ENST00000494934 GLTPQ9NZD2 209 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 ABCC12Q96J65 1359 aa2.44□□□□□ -2.02
SRRM1-218ENST00000494934 DOCK5Q9H7D0 1870 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 ITGB4P16144 1822 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 GRIFINA4D1Z8 144 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 C11orf86A6NJI1 115 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 OR4C45A6NMZ5 311 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 A8MUN3 132 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 C2orf74A8MZ97 194 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 LST1O00453 97 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 NDUFB2O95178 105 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 IFNA21P01568 189 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 CBR1P16152 277 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 ALOX5APP20292 161 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 GZMHP20718 246 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 GABRA2P47869 451 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 TAS2R30P59541 319 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 HES1Q14469 280 aa2.43□□□□□ -2.02
SRRM1-218ENST00000494934 TSNQ15631 228 aaKnown RBP2.43□□□□□ -2.02
SRRM1-218ENST00000494934 LIN52Q52LA3 116 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms