RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ADCYAP1P18509 176 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 SNCAP37840 140 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 SP5Q6BEB4 398 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 SLC25A24Q6NUK1 477 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 OSR1Q8TAX0 266 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 NARS2Q96I59 477 aaKnown RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 UPK2O00526 184 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 LY86O95711 162 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 TSPAN15O95858 294 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 APOA2P02652 100 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 CD5P06127 495 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 PRB3Q04118 309 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM177Q53S58 311 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 OR10P1Q8NGE3 313 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 TNFRSF14Q92956 283 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
ATG4B-225ENST00000494465 FLNCQ14315 2725 aa13.41□□□□□ -0.26
ATG4B-225ENST00000494465 SAA1P0DJI8 122 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-225ENST00000494465 HSPE1P61604 102 aaKnown RBP13.41□□□□□ -0.26
ATG4B-225ENST00000494465 ATP6V1FQ16864 119 aa13.41□□□□□ -0.26
ATG4B-225ENST00000494465 PUSL1Q8N0Z8 303 aaKnown RBP13.41□□□□□ -0.26
ATG4B-225ENST00000494465 TAF15Q92804 592 aaKnown RBP eCLIP13.41□□□□□ -0.26
ATG4B-225ENST00000494465 PINX1Q96BK5 328 aaKnown RBP13.41□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM147Q9BVK8 224 aa13.41□□□□□ -0.26
ATG4B-225ENST00000494465 BET1LQ9NYM9 111 aa13.41□□□□□ -0.26
ATG4B-225ENST00000494465 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
ATG4B-225ENST00000494465 A0A1W2PPH5 198 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 H7C2Y5 167 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 SPSB3Q6PJ21 355 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 PCGF1Q9BSM1 259 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 MS4A7Q9GZW8 240 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-225ENST00000494465 UQCC1Q9NVA1 299 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 FAM157AC9JC47 383 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 C9JQL5 133 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 RNASEK-C17orf49H0YIS7 233 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 RRHO14718 337 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 MDKP21741 143 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-225ENST00000494465 HLA-DRB5Q30154 266 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 AKR1C8PQ5T2L2 129 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 PDPNQ86YL7 162 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 TGIF2LXQ8IUE1 241 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 COMMD1Q8N668 190 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 Q8N7P7 452 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 HARBI1Q96MB7 349 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-225ENST00000494465 HIPK2Q9H2X6 1198 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 TREM1Q9NP99 234 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 HEYLQ9NQ87 328 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-225ENST00000494465 PRNDQ9UKY0 176 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 OR51B2Q9Y5P1 312 aa13.4□□□□□ -0.26
ATG4B-225ENST00000494465 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 APOC3P02656 99 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 LIPFP07098 398 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 RNF224P0DH78 156 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 C10orf91Q5T1B1 145 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 CENPVQ7Z7K6 275 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-225ENST00000494465 LHX4Q969G2 390 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
ATG4B-225ENST00000494465 CLEC7AQ9BXN2 247 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 VSIRQ9H7M9 311 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 ZFYVE26Q68DK2 2539 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 DOPEY1Q5JWR5 2465 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 BEND2Q8NDZ0 799 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 AIFM2Q9BRQ8 373 aa13.39□□□□□ -0.27
ATG4B-225ENST00000494465 USP9XQ93008 2570 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-225ENST00000494465 KBTBD11O94819 623 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 IFNA10P01566 189 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 PRB1P04280 392 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 HOXA1P49639 335 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-225ENST00000494465 DVL1P1P54792 670 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-225ENST00000494465 CCL20P78556 96 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 OR4C13Q8NGP0 309 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 CLCC1Q96S66 551 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 SSBP3Q9BWW4 388 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-225ENST00000494465 RPRMQ9NS64 109 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 WASHC3Q9Y3C0 194 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 SPTAN1Q13813 2472 aaKnown RBP13.38□□□□□ -0.27
ATG4B-225ENST00000494465 IGLV2-23P01705 113 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 EFNA4P52798 201 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 PRRX1P54821 245 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 SERF2P84101 59 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 ONECUT1Q9UBC0 465 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
ATG4B-225ENST00000494465 A0A1B0GV50 99 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 BUB1B-PAK6H3BSN5 160 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 OVOL3O00110 214 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 IL3RAP26951 378 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-225ENST00000494465 RPP30P78346 268 aaKnown RBP13.37□□□□□ -0.27
ATG4B-225ENST00000494465 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms