RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SRRM4A7MD48 611 aaKnown RBP16.63■□□□□ 0.25
KPNA1-210ENST00000494339 FAM90A26D6RGX4 464 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 HRASP01112 189 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 MC5RP33032 325 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 RAB13P51153 203 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 VAMP2P63027 116 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 TMEM249Q2WGJ8 235 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 HARBI1Q96MB7 349 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 MAGT1Q9H0U3 335 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 TMEM140Q9NV12 185 aa16.63■□□□□ 0.25
KPNA1-210ENST00000494339 RBMXL2O75526 392 aaKnown RBP16.62■□□□□ 0.25
KPNA1-210ENST00000494339 TGFAP01135 160 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 OR9G9P0C7N8 305 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 RAB14P61106 215 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 MIDNQ504T8 468 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 OR4C13Q8NGP0 309 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 TRAV40A0A0B4J280 105 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 TIMM23O14925 209 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 SSSCA1O60232 199 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 IGHV4-31P0DP07 118 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 SAA4P35542 130 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 ARHGDIBP52566 201 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
KPNA1-210ENST00000494339 MINOS1Q5TGZ0 78 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 OR4A47Q6IF82 309 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 DYNAPQ8N1N2 210 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 OSR1Q8TAX0 266 aaPredicted RBP16.62■□□□□ 0.25
KPNA1-210ENST00000494339 RAB40CQ96S21 281 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 MINOS1-NBL1R4GNA1 71 aa16.62■□□□□ 0.25
KPNA1-210ENST00000494339 AKAP9Q99996 3911 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 TPT1P13693 172 aaKnown RBP16.61■□□□□ 0.25
KPNA1-210ENST00000494339 OR2B8PP59922 312 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 EIF5AP63241 154 aaKnown RBP16.61■□□□□ 0.25
KPNA1-210ENST00000494339 TMEM177Q53S58 311 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 OR2C3Q8N628 320 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 RITA1Q96K30 269 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 SLC25A31Q9H0C2 315 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 CYTL1Q9NRR1 136 aa16.61■□□□□ 0.25
KPNA1-210ENST00000494339 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.61■□□□□ 0.25
KPNA1-210ENST00000494339 LYRM2Q9NU23 88 aaPredicted RBP16.61■□□□□ 0.25
KPNA1-210ENST00000494339 TBL2Q9Y4P3 447 aaKnown RBP16.61■□□□□ 0.25
KPNA1-210ENST00000494339 TRAV3A0A0B4J244 114 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 FAM90A9PA6NNJ1 464 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 NPFFO15130 113 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 CHST1O43916 411 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 GATA3P23771 443 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 CLLU1Q5K131 121 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 RUSC1-AS1Q66K80 236 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 ALKAL2Q6UX46 152 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 PIP4P2Q8N4L2 257 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 FOXC2Q99958 501 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 MS4A7Q9GZW8 240 aaPredicted RBP16.6■□□□□ 0.25
KPNA1-210ENST00000494339 ABCA1O95477 2261 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 POU2AF1Q16633 256 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 SLC7A5P1Q8MH63 180 aa16.6■□□□□ 0.25
KPNA1-210ENST00000494339 SYNGR2O43760 224 aa16.59■□□□□ 0.25
KPNA1-210ENST00000494339 AVPP01185 164 aa16.59■□□□□ 0.25
KPNA1-210ENST00000494339 SAA1P0DJI8 122 aaPredicted RBP16.59■□□□□ 0.25
KPNA1-210ENST00000494339 BAP18Q8IXM2 172 aa16.59■□□□□ 0.25
KPNA1-210ENST00000494339 AJUBAQ96IF1 538 aa16.59■□□□□ 0.25
KPNA1-210ENST00000494339 TNCP24821 2201 aa16.59■□□□□ 0.25
KPNA1-210ENST00000494339 TET2Q6N021 2002 aaPredicted RBP16.59■□□□□ 0.25
KPNA1-210ENST00000494339 IGHV1-69DA0A0B4J2H0 117 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 MED6O75586 246 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 IGHV1-69P01742 117 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 IGHV4-38-2P0DP08 117 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 CAV2P51636 162 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 RPL23AP62750 156 aaKnown RBP16.58■□□□□ 0.25
KPNA1-210ENST00000494339 CCDC144NLQ6NUI1 221 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 BRD3OSQ6XYD6 125 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 CIARTQ8N365 385 aaPredicted RBP16.58■□□□□ 0.25
KPNA1-210ENST00000494339 OR4A16Q8NH70 328 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 CFHR4Q92496 578 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 QTRT1Q9BXR0 403 aaKnown RBP16.58■□□□□ 0.25
KPNA1-210ENST00000494339 FBXL17Q9UF56 701 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 WSB1Q9Y6I7 421 aa16.58■□□□□ 0.25
KPNA1-210ENST00000494339 JTBO76095 146 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 CD24P25063 80 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 RELBQ01201 579 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 MALSU1Q96EH3 234 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 AIFM2Q9BRQ8 373 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 HSPB7Q9UBY9 170 aa16.58■□□□□ 0.24
KPNA1-210ENST00000494339 RPS10-NUDT3A0A1W2PQS6 291 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 OOSP1A8MZH6 123 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 VENTXO95231 258 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 IGLV2-23P01705 113 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 TAS2R30P59541 319 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 TNFRSF9Q07011 255 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 CACFD1Q9UGQ2 172 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 ITPR3Q14573 2671 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 CYSRT1A8MQ03 144 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 EWSR1Q01844 656 aaKnown RBP eCLIP16.57■□□□□ 0.24
KPNA1-210ENST00000494339 BAXQ07812 192 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 TMEM252Q8N6L7 170 aa16.57■□□□□ 0.24
KPNA1-210ENST00000494339 CELSR1Q9NYQ6 3014 aa16.56■□□□□ 0.24
KPNA1-210ENST00000494339 CSPG4Q6UVK1 2322 aa16.56■□□□□ 0.24
KPNA1-210ENST00000494339 FAM24AA6NFZ4 105 aa16.56■□□□□ 0.24
KPNA1-210ENST00000494339 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
KPNA1-210ENST00000494339 TMEM50AO95807 157 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms