RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 BEX1Q9HBH7 125 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 CNIH1O95406 144 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 VSIG10L2P0DP72 767 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 G6PCP35575 357 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
ACTB-213ENST00000493945 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
ACTB-213ENST00000493945 OXA1LQ15070 435 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 C12orf45Q8N5I9 185 aaPredicted RBP11.89□□□□□ -0.51
ACTB-213ENST00000493945 Q8N9W7 124 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 OR4F5Q8NH21 305 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 ABHD5Q8WTS1 349 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 MITD1Q8WV92 249 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 ESM1Q9NQ30 184 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 SIGLEC9Q9Y336 463 aa11.89□□□□□ -0.51
ACTB-213ENST00000493945 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 FAM181BA6NEQ2 426 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 SSNA1O43805 119 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 F2RL1P55085 397 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 TMEM267Q0VDI3 215 aaPredicted RBP11.88□□□□□ -0.51
ACTB-213ENST00000493945 TATDN3Q17R31 274 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 SLC35E3Q7Z769 313 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
ACTB-213ENST00000493945 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
ACTB-213ENST00000493945 SLC35G3Q8N808 338 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 SEC22AQ96IW7 307 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 CLCC1Q96S66 551 aa11.88□□□□□ -0.51
ACTB-213ENST00000493945 AP4M1O00189 453 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 CHST1O43916 411 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 CA2P00918 260 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 GNB1P62873 340 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 TNXAQ16473 311 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 PRSS8Q16651 343 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
ACTB-213ENST00000493945 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 UXS1Q8NBZ7 420 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 TMEM68Q96MH6 324 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 PLSCR3Q9NRY6 295 aa11.87□□□□□ -0.51
ACTB-213ENST00000493945 A0A1B0GU03 582 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 UPK2O00526 184 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 CYB5BO43169 146 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 NDUFA7O95182 113 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 SLC25A6P12236 298 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 HLA-GP17693 338 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 CNTFRP26992 372 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
ACTB-213ENST00000493945 SLC35B1P78383 322 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
ACTB-213ENST00000493945 COA4Q9NYJ1 87 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 ZNF257Q9Y2Q1 563 aa11.86□□□□□ -0.51
ACTB-213ENST00000493945 A0A1W2PN81 502 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 SRRM4A7MD48 611 aaKnown RBP11.85□□□□□ -0.51
ACTB-213ENST00000493945 LY86O95711 162 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 IGHG2P01859 326 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 HOXB5P09067 269 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 CHRNA7P36544 502 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
ACTB-213ENST00000493945 SMCO1Q147U7 214 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 FXYD3Q14802 87 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 OR1S1Q8NH92 325 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
ACTB-213ENST00000493945 OR51J1Q9H342 316 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 ZNF430Q9H8G1 570 aaPredicted RBP11.85□□□□□ -0.51
ACTB-213ENST00000493945 PARP11Q9NR21 331 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 ZFP57Q9NU63 452 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 ZNF580Q9UK33 172 aa11.85□□□□□ -0.51
ACTB-213ENST00000493945 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
ACTB-213ENST00000493945 ANK3Q12955 4377 aaKnown RBP11.84□□□□□ -0.51
ACTB-213ENST00000493945 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 MED6O75586 246 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 TSPAN9O75954 239 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 IFNA17P01571 189 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 IGKV1-39P01597 117 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 IGKV1D-39P04432 117 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 CRYGBP07316 175 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 SPNP16150 400 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 COMPP49747 757 aaPredicted RBP11.84□□□□□ -0.51
ACTB-213ENST00000493945 FOXL1Q12952 345 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 GSG1LQ6UXU4 331 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 LHFPL5Q8TAF8 219 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
ACTB-213ENST00000493945 RITA1Q96K30 269 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 QTRT1Q9BXR0 403 aaKnown RBP11.84□□□□□ -0.51
ACTB-213ENST00000493945 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms