RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 GRPEL2Q8TAA5 225 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM140Q9NV12 185 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 COMMD9Q9P000 198 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 G3V318 75 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 AP4M1O00189 453 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 KCNAB3O43448 404 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 CNIH1O95406 144 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 EGR2P11161 476 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 MYOD1P15172 320 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 SUPT4H1P63272 117 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 TNXAQ16473 311 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 TRIM16LQ309B1 348 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 C10orf55Q5SWW7 151 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 ZNF562Q6V9R5 426 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 STPG2Q8N412 459 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 ERVK-16P61578 105 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 ASAH1Q13510 395 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 IZUMO4Q1ZYL8 232 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 SGPP2Q8IWX5 399 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 CENPSQ8N2Z9 138 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 GLYATL2Q8WU03 294 aa14.07□□□□□ -0.16
PDLIM7-208ENST00000493815 OPN1MWP04001 364 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 APELAP0DMC3 54 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 OPN1MW2P0DN77 364 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 OPN1MW3P0DN78 364 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 UCP1P25874 307 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 SLC6A1P30531 599 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 POU2AF1Q16633 256 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 ECSCRQ19T08 205 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 LHFPL5Q8TAF8 219 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 VSTM2AQ8TAG5 236 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 ARPC1AQ92747 370 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 SEC22AQ96IW7 307 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 TSC22D3Q99576 134 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM222Q9H0R3 208 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 FAM212BQ9NTI7 297 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 NSG2Q9Y328 171 aa14.06□□□□□ -0.16
PDLIM7-208ENST00000493815 TNCP24821 2201 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 IGF1P05019 195 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 ANXA7P20073 488 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 VAMP1P23763 118 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 OR5AU1Q8NGC0 362 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 WIPF2Q8TF74 440 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 AIFM2Q9BRQ8 373 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 BET1LQ9NYM9 111 aa14.05□□□□□ -0.16
PDLIM7-208ENST00000493815 PSMB11A5LHX3 300 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 IGKV1-5P01602 117 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 TCRBP04435 133 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 CD28P10747 220 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 PPP1R1AQ13522 171 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM128Q5BJH2 165 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 MZT2BQ6NZ67 158 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 LFNGQ8NES3 379 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 CHPT1Q8WUD6 406 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 C20orf85Q9H1P6 137 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 KCNIP3Q9Y2W7 256 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 DNHD1Q96M86 4753 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 TRAV6A0A075B6T7 132 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 FAM240BA0A1B0GVZ2 78 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 MSGN1A6NI15 193 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 E7EUB6 86 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 UPK2O00526 184 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 ACTL6BO94805 426 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 IL6RP08887 468 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 VDAC1P21796 283 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 RPL8P62917 257 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM187Q14656 261 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 LCNL1Q6ZST4 164 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 SLC25A42Q86VD7 318 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 GALNT14Q96FL9 552 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 ZNF747Q9BV97 191 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 NUDT15Q9NV35 164 aa14.04□□□□□ -0.16
PDLIM7-208ENST00000493815 ANK2Q01484 3957 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 TRAV41A0A0B4J266 112 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 DBX1A6NMT0 343 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 CDS2O95674 445 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 HLA-GP17693 338 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 AKR1C2P52895 323 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 OR2B8PP59922 312 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 TCTEX1D4Q5JR98 221 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 TMEM268Q5VZI3 342 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 H2BFWTQ7Z2G1 175 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 SELENOHQ8IZQ5 122 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 OR4A5Q8NH83 315 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 SGMS2Q8NHU3 365 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 CASTOR1Q8WTX7 329 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 NUBP2Q9Y5Y2 271 aa14.03□□□□□ -0.16
PDLIM7-208ENST00000493815 A0A0G2JRQ6 117 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 A0A1B0GW64 132 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 CREBL2O60519 120 aaPredicted RBP14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 B3GALNT1O75752 331 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 RAB25P57735 213 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 DHODHQ02127 395 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 UNQ5815/PRO19632Q6UWF5 114 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms