RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 MARCH11A6NNE9 402 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 UPK2O00526 184 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 ATP6V0E1O15342 81 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 B3GALNT1O75752 331 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 KBTBD11O94819 623 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 OR2A4O95047 310 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 CDS2O95674 445 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 OR9G9P0C7N8 305 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 P0C879 139 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 MYOD1P15172 320 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 SPNP16150 400 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 COMPP49747 757 aaPredicted RBP9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 FOXL1Q12952 345 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 IZUMO4Q1ZYL8 232 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 WIPF2Q8TF74 440 aaPredicted RBP9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 OR2A7Q96R45 310 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 NUDT15Q9NV35 164 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 BET1LQ9NYM9 111 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 RNF114Q9Y508 228 aa9.54□□□□□ -0.88
RHBDF1-211ENST00000493647 TRAV6A0A075B6T7 132 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 A0A1B0GW64 132 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 SFT2D2O95562 160 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 GNB1P62873 340 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 FXYD3Q14802 87 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 TRIM16LQ309B1 348 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 C19orf54Q5BKX5 351 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 HIST2H2BDQ6DRA6 164 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 TMEM56Q96MV1 263 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 FAM103A1Q9BTL3 118 aaKnown RBP9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 PARP11Q9NR21 331 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 TMEM56-RWDD3S4R434 201 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
RHBDF1-211ENST00000493647 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 C9orf170A2RU37 121 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 E7EUB6 86 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 KCNAB3O43448 404 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 IGF1P05019 195 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 H2AFB2P0C5Z0 115 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 OR4E1P0C645 316 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 VAMP1P23763 118 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 CRIP2P52943 208 aaPredicted RBP9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 RAB25P57735 213 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 DEFA1P59665 94 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 DEFA3P59666 94 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 UBE2MP61081 183 aaKnown RBP9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 ERVK-16P61578 105 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 TNXAQ16473 311 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 ASPHD1Q5U4P2 390 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 MMD2Q8IY49 270 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 CADM3Q8N126 398 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 STPG2Q8N412 459 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 DUSP18Q8NEJ0 188 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 OR4A5Q8NH83 315 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 GRPEL2Q8TAA5 225 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 VSTM2AQ8TAG5 236 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 ENKURQ8TC29 256 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 CASTOR1Q8WTX7 329 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 ARPC1AQ92747 370 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 AIFM2Q9BRQ8 373 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 ALX4Q9H161 411 aaPredicted RBP9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 PALMDQ9NP74 551 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 NSG2Q9Y328 171 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 NUBP2Q9Y5Y2 271 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 TNCP24821 2201 aa9.52□□□□□ -0.89
RHBDF1-211ENST00000493647 CGB1A6NKQ9 187 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 DBX1A6NMT0 343 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 G3V318 75 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 HAX1O00165 279 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 AP4M1O00189 453 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 HLA-GP17693 338 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 MECP2P51608 486 aaKnown RBP9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 CFHR3Q02985 330 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 DHRS2Q13268 280 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 Q6ZRM9 215 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 LYG2Q86SG7 212 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 FOXRED2Q8IWF2 684 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 SLC35G3Q8N808 338 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 OR52B4Q8NGK2 314 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 SRSF12Q8WXF0 261 aaKnown RBP9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 RBPMSQ93062 196 aaKnown RBP9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 IL22RA2Q969J5 263 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 SEC22CQ9BRL7 303 aa9.51□□□□□ -0.89
RHBDF1-211ENST00000493647 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms