RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 MZT2BQ6NZ67 158 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 IL22RA2Q969J5 263 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 TP53RKQ96S44 253 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 TSC22D3Q99576 134 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 LINC00854A0A1B0GVQ3 168 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 VDAC1P21796 283 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 CCR6P51684 374 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
TRA2A-208ENST00000490942 CFHR3Q02985 330 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 FXYD3Q14802 87 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM95Q3KNT9 176 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 CENPVQ7Z7K6 275 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-208ENST00000490942 SLC25A42Q86VD7 318 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 VKORC1L1Q8N0U8 176 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 CENPSQ8N2Z9 138 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 DMBX1Q8NFW5 382 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 GLYATL2Q8WU03 294 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 CITED1Q99966 193 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 ALX4Q9H161 411 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-208ENST00000490942 ZNF430Q9H8G1 570 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-208ENST00000490942 TPSG1Q9NRR2 321 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 STAB1Q9NY15 2570 aa12.47□□□□□ -0.41
TRA2A-208ENST00000490942 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 LINC01548A6NM66 108 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 UPK2O00526 184 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 ATP6V0E1O15342 81 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 CNIH1O95406 144 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 KRASP01116 189 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 OR5AC1P0C628 307 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 DEFA1P59665 94 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 DEFA3P59666 94 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
TRA2A-208ENST00000490942 NDPQ00604 133 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 C19orf54Q5BKX5 351 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.41
TRA2A-208ENST00000490942 FAM219AQ8IW50 185 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 ADAD2Q8NCV1 583 aaKnown RBP12.46□□□□□ -0.41
TRA2A-208ENST00000490942 SPIN2AQ99865 258 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 SRSF8Q9BRL6 282 aaKnown RBP12.46□□□□□ -0.41
TRA2A-208ENST00000490942 PALMDQ9NP74 551 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 TBC1D24Q9ULP9 559 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
TRA2A-208ENST00000490942 TRAV41A0A0B4J266 112 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 ARPC1BO15143 372 aaKnown RBP12.45□□□□□ -0.42
TRA2A-208ENST00000490942 BRI3O95415 125 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 IGHG4P01861 327 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 ELANEP08246 267 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-208ENST00000490942 AKR1C4P17516 323 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 HLA-GP17693 338 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
TRA2A-208ENST00000490942 SUPT4H1P63272 117 aaKnown RBP12.45□□□□□ -0.42
TRA2A-208ENST00000490942 PJVKQ0ZLH3 352 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 TRIM16LQ309B1 348 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 TEX38Q6PEX7 206 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 TMED4Q7Z7H5 227 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 RNF152Q8N8N0 203 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 MINDY2Q8NBR6 621 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 OR5AU1Q8NGC0 362 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
TRA2A-208ENST00000490942 CLCC1Q96S66 551 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 FKBP11Q9NYL4 201 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 PRNDQ9UKY0 176 aa12.45□□□□□ -0.42
TRA2A-208ENST00000490942 FAM240BA0A1B0GVZ2 78 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 DUXBA0A1W2PPF3 345 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 SNAPC5O75971 98 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 TCRBP04435 133 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 P0C879 139 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 G6PCP35575 357 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 MECP2P51608 486 aaKnown RBP12.44□□□□□ -0.42
TRA2A-208ENST00000490942 IFITM3Q01628 133 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 FOXE3Q13461 319 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 TMEM187Q14656 261 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 TNXAQ16473 311 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 SP6Q3SY56 376 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 H2BFWTQ7Z2G1 175 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 HSD17B13Q7Z5P4 300 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-208ENST00000490942 LRTM2Q8N967 370 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 OR5M8Q8NGP6 311 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 SRSF12Q8WXF0 261 aaKnown RBP12.44□□□□□ -0.42
TRA2A-208ENST00000490942 LSM10Q969L4 123 aaKnown RBP12.44□□□□□ -0.42
TRA2A-208ENST00000490942 NOL4LQ96MY1 436 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-208ENST00000490942 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
TRA2A-208ENST00000490942 TNCP24821 2201 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms