RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TEX22C9J3V5 150 aa24■■□□□ 1.43
LDB1-204ENST00000490751 RPL27AP46776 148 aaKnown RBP24■■□□□ 1.43
LDB1-204ENST00000490751 SYNJ2BPP57105 145 aa24■■□□□ 1.43
LDB1-204ENST00000490751 CATR1Q13166 79 aa24■■□□□ 1.43
LDB1-204ENST00000490751 ZNF818PQ6ZRF7 136 aa24■■□□□ 1.43
LDB1-204ENST00000490751 FAM223AQ8IWN6 122 aa24■■□□□ 1.43
LDB1-204ENST00000490751 ASCL2Q99929 193 aa24■■□□□ 1.43
LDB1-204ENST00000490751 TRBV9A0A0B4J1U6 114 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 SULT1C2O00338 296 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 MAS1LP35410 378 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 HERV-K104P61576 105 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 VBP1P61758 197 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 SLC25A42Q86VD7 318 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 OR9G4Q8NGQ1 327 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 FYTTD1Q96QD9 318 aaKnown RBP23.99■■□□□ 1.43
LDB1-204ENST00000490751 ADAM30Q9UKF2 790 aa23.99■■□□□ 1.43
LDB1-204ENST00000490751 E7EUB6 86 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 RBFOX2O43251 390 aaKnown RBP eCLIP23.98■■□□□ 1.436e-7■■■■□ 21.9
LDB1-204ENST00000490751 IGLV1-51P01701 117 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 EIF4EP06730 217 aaKnown RBP23.98■■□□□ 1.43
LDB1-204ENST00000490751 IL6RP08887 468 aaPredicted RBP23.98■■□□□ 1.43
LDB1-204ENST00000490751 ATP5G2Q06055 141 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 EXOSC2Q13868 293 aaKnown RBP23.98■■□□□ 1.43
LDB1-204ENST00000490751 RPEL1Q2QD12 228 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 ANKRD13BQ86YJ7 626 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 COMMD3Q9UBI1 195 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 ZNF257Q9Y2Q1 563 aa23.98■■□□□ 1.43
LDB1-204ENST00000490751 PRSS3P35030 304 aa23.97■■□□□ 1.43
LDB1-204ENST00000490751 RFX2P48378 723 aa23.97■■□□□ 1.43
LDB1-204ENST00000490751 RPL8P62917 257 aaKnown RBP23.97■■□□□ 1.43
LDB1-204ENST00000490751 OR4A47Q6IF82 309 aa23.97■■□□□ 1.43
LDB1-204ENST00000490751 OR51H1Q8NH63 302 aa23.97■■□□□ 1.43
LDB1-204ENST00000490751 A0A1B0GW64 132 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 OR2J3O76001 311 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 PMP2P02689 132 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 ZNF735P0CB33 412 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 C19orf35Q6ZS72 473 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 NECAP1Q8NC96 275 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 OR5H2Q8NGV7 314 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 AIFM2Q9BRQ8 373 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 BET1LQ9NYM9 111 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 U3KQK5 164 aa23.96■■□□□ 1.43
LDB1-204ENST00000490751 DPPA5A6NC42 116 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 NPIPB5A8MRT5 1133 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 NAT1P18440 290 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 TAS2R46P59540 309 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 TATDN3Q17R31 274 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 AADACL3Q5VUY0 350 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 DHRS11Q6UWP2 260 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 OR4A5Q8NH83 315 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 WWC2-AS2Q96NR7 200 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 ZNF2Q9BSG1 426 aaPredicted RBP23.95■■□□□ 1.42
LDB1-204ENST00000490751 HRASLSQ9HDD0 168 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 SLC2A9Q9NRM0 540 aa23.95■■□□□ 1.42
LDB1-204ENST00000490751 HPRT1P00492 218 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 MYOD1P15172 320 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 HLA-GP17693 338 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 GNRHRP30968 328 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 TAS2R31P59538 309 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 IL34Q6ZMJ4 242 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 BORCS5Q969J3 196 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 MOB3AQ96BX8 217 aa23.94■■□□□ 1.42
LDB1-204ENST00000490751 BMPR1BO00238 502 aa23.93■■□□□ 1.42
LDB1-204ENST00000490751 APOA1P02647 267 aa23.93■■□□□ 1.42
LDB1-204ENST00000490751 AREGP15514 252 aa23.93■■□□□ 1.42
LDB1-204ENST00000490751 C15orf32Q32M92 178 aa23.93■■□□□ 1.42
LDB1-204ENST00000490751 NQO2P16083 231 aa23.92■■□□□ 1.42
LDB1-204ENST00000490751 POU2AF1Q16633 256 aa23.92■■□□□ 1.42
LDB1-204ENST00000490751 CMTM3Q96MX0 182 aa23.92■■□□□ 1.42
LDB1-204ENST00000490751 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.91■■□□□ 1.42
LDB1-204ENST00000490751 SMIM31A0A1B0GVY4 71 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 S1PR2O95136 353 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 SMIM18P0DKX4 95 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 CD300LFQ8TDQ1 290 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 GPX8Q8TED1 209 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 FXYD6Q9H0Q3 95 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 PLEKHA2Q9HB19 425 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 FBXL7Q9UJT9 491 aa23.91■■□□□ 1.42
LDB1-204ENST00000490751 RLN1P04808 185 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 CRYGCP07315 174 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 CSN3P07498 182 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 HLA-DMAP28067 261 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 PSMB6P28072 239 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 LYSMD2Q8IV50 215 aa23.9■■□□□ 1.42
LDB1-204ENST00000490751 NAA50Q9GZZ1 169 aaKnown RBP23.9■■□□□ 1.42
LDB1-204ENST00000490751 TRAV3A0A0B4J244 114 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 CGB1A6NKQ9 187 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 UPK2O00526 184 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 HPGDSO60760 199 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 FRMD6-AS1P0C7T7 363 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 HRH1P35367 487 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 SNX29P2Q8IUI4 249 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 DMBX1Q8NFW5 382 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 OR6F1Q8NGZ6 308 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 FANCD2OSQ96PS1 177 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 TMEM140Q9NV12 185 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 COMMD9Q9P000 198 aa23.89■■□□□ 1.41
LDB1-204ENST00000490751 HUWE1Q7Z6Z7 4374 aaKnown RBP23.88■■□□□ 1.41
LDB1-204ENST00000490751 DHFRP00374 187 aa23.88■■□□□ 1.41
LDB1-204ENST00000490751 REG1AP05451 166 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms