RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SCGB3A2Q96PL1 93 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 CLCC1Q96S66 551 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 GPHA2Q96T91 129 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 SPIN2AQ99865 258 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 SPIN2BQ9BPZ2 258 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 SRRQ9GZT4 340 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 LINC00527Q9UJ94 153 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 FBXO7Q9Y3I1 522 aa8.68□□□□□ -1.02
CPSF7-212ENST00000489728 MARCH11A6NNE9 402 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 G3V318 75 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 H0Y980 276 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 MPPED1O15442 326 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 S1PR2O95136 353 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 IL6RP08887 468 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 CDX1P47902 265 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 PPP5CP53041 499 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 PIGPP57054 158 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 GNB1P62873 340 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 RPL8P62917 257 aaKnown RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 PHLDA2Q53GA4 152 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 THOC7Q6I9Y2 204 aaKnown RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 OR51S1Q8NGJ8 323 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 OR13C8Q8NGS7 320 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 GRPEL2Q8TAA5 225 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 MRGPRFQ96AM1 343 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 R3HDM4Q96D70 268 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 UBE2E2Q96LR5 201 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 SLA2Q9H6Q3 261 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 ZNF430Q9H8G1 570 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 COPZ2Q9P299 210 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 C14orf166Q9Y224 244 aaKnown RBP8.67□□□□□ -1.02
CPSF7-212ENST00000489728 WSB1Q9Y6I7 421 aa8.67□□□□□ -1.02
CPSF7-212ENST00000489728 A0A1W2PN81 502 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 ATG12O94817 140 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 TSPAN15O95858 294 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 SERPINE2P07093 398 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 CHRNA7P36544 502 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 TNXAQ16473 311 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 ECSCRQ19T08 205 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 ZNF585BQ52M93 769 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 KHDC1LQ5JSQ8 128 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 FAAP20Q6NZ36 180 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 IDO2Q6ZQW0 420 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 SLC25A42Q86VD7 318 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 ZNF695Q8IW36 515 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 VKORC1L1Q8N0U8 176 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 LFNGQ8NES3 379 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 DMBX1Q8NFW5 382 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 MARCH1Q8TCQ1 289 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 C4orf3Q8WVX3 66 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 SRSF12Q8WXF0 261 aaKnown RBP8.66□□□□□ -1.02
CPSF7-212ENST00000489728 TSC22D3Q99576 134 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
CPSF7-212ENST00000489728 PTTG2Q9NZH5 202 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 GPR132Q9UNW8 380 aa8.66□□□□□ -1.02
CPSF7-212ENST00000489728 VWFP04275 2813 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 PIGBOS1A0A0B4J2F0 54 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 C3orf85A0A1B0GTC6 90 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 PF4V1P10720 104 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 HLA-GP17693 338 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 LPAR6P43657 344 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 RPL27AP46776 148 aaKnown RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 INPP1P49441 399 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 RAB9AP51151 201 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 RUNX1Q01196 453 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 TRIQKQ629K1 86 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 FAM110DQ8TAY7 271 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 S100ZQ8WXG8 99 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 SLC25A21Q9BQT8 299 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 C7orf50Q9BRJ6 194 aaKnown RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 FAM103A1Q9BTL3 118 aaKnown RBP8.65□□□□□ -1.02
CPSF7-212ENST00000489728 HRASLSQ9HDD0 168 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 MCUBQ9NWR8 336 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 FKBP11Q9NYL4 201 aa8.65□□□□□ -1.02
CPSF7-212ENST00000489728 PKD1L1Q8TDX9 2849 aa8.65□□□□□ -1.03
CPSF7-212ENST00000489728 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 NUDT19A8MXV4 375 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 UPK2O00526 184 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 PLXNB1O43157 2135 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 SOX15O60248 233 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 PI3P19957 117 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 UCP1P25874 307 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 MYCNOSP40205 109 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 HSD17B13Q7Z5P4 300 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 KLHL30-AS1Q8NEE0 82 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 SEC22AQ96IW7 307 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms