RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
HLA-F-229ENST00000489502 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
HLA-F-229ENST00000489502 ZNF580Q9UK33 172 aa11.3□□□□□ -0.6
HLA-F-229ENST00000489502 MGAM2Q2M2H8 2515 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 A0A1W2PN81 502 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 H0Y980 276 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 OR2A4O95047 310 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 MYOD1P15172 320 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 G6PCP35575 357 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 CHRNA7P36544 502 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 CRIP2P52943 208 aaPredicted RBP11.29□□□□□ -0.6
HLA-F-229ENST00000489502 ERVK-16P61578 105 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 CD83Q01151 205 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 POU2AF1Q16633 256 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 SP6Q3SY56 376 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 MMD2Q8IY49 270 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 LFNGQ8NES3 379 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 CASTOR1Q8WTX7 329 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 SRSF12Q8WXF0 261 aaKnown RBP11.29□□□□□ -0.6
HLA-F-229ENST00000489502 OR2A7Q96R45 310 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
HLA-F-229ENST00000489502 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 SOX15O60248 233 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 CREBL2O60519 120 aaPredicted RBP11.28□□□□□ -0.6
HLA-F-229ENST00000489502 ACTL6BO94805 426 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 KRASP01116 189 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
HLA-F-229ENST00000489502 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
HLA-F-229ENST00000489502 CCR6P51684 374 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 LINC00299Q6ZSB3 139 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 ADAD2Q8NCV1 583 aaKnown RBP11.28□□□□□ -0.6
HLA-F-229ENST00000489502 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 PHB2Q99623 299 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 BET1LQ9NYM9 111 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
HLA-F-229ENST00000489502 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
HLA-F-229ENST00000489502 TEX13DA0A0J9YY54 714 aaPredicted RBP11.27□□□□□ -0.61
HLA-F-229ENST00000489502 M0QZ24 198 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 IGHG4P01861 327 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 OPN1MWP04001 364 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 SERPINE2P07093 398 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 OR5AC1P0C628 307 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 OPN1MW2P0DN77 364 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 OPN1MW3P0DN78 364 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 PF4V1P10720 104 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 CD40LGP29965 261 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
HLA-F-229ENST00000489502 FOXE3Q13461 319 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
HLA-F-229ENST00000489502 ASPHD1Q5U4P2 390 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 TMED4Q7Z7H5 227 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 NDUFA11Q86Y39 141 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 NUBP2Q9Y5Y2 271 aa11.27□□□□□ -0.61
HLA-F-229ENST00000489502 A0A1B0GW64 132 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 CRYM-AS1A6NIL9 109 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 UPK2O00526 184 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 HLA-GP17693 338 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 PSMB8P28062 276 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 BTCP35070 178 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 RPL27AP46776 148 aaKnown RBP11.26□□□□□ -0.61
HLA-F-229ENST00000489502 OR2B8PP59922 312 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 RPL23AP62750 156 aaKnown RBP11.26□□□□□ -0.61
HLA-F-229ENST00000489502 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 SEC22AQ96IW7 307 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 CCDC32Q9BV29 185 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 FAM212BQ9NTI7 297 aaPredicted RBP11.26□□□□□ -0.61
HLA-F-229ENST00000489502 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 NSG2Q9Y328 171 aa11.26□□□□□ -0.61
HLA-F-229ENST00000489502 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
HLA-F-229ENST00000489502 HMX3A6NHT5 357 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 MSGN1A6NI15 193 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 ELANEP08246 267 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 AKR1C4P17516 323 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 UCP1P25874 307 aa11.25□□□□□ -0.61
HLA-F-229ENST00000489502 AKR1C2P52895 323 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms