RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 SMIM8Q96KF7 97 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 TMEM140Q9NV12 185 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 DLL3Q9NYJ7 618 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 MRPS18CQ9Y3D5 142 aaKnown RBP9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 RBP4P02753 201 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 PTGDSP41222 190 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 NBL1P41271 181 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 ARF6P62330 175 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 TUBA4BQ9H853 241 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 CLDN16Q9Y5I7 305 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 HELZP42694 1942 aaKnown RBP9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 HPRT1P00492 218 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 OTX1P32242 354 aaPredicted RBP9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 ZNRF1Q8ND25 227 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 Q8WTZ3 238 aa9.92□□□□□ -0.82
LDLRAP1-207ENST00000488127 IGHV2OR16-5A0A0B4J2B6 119 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 PSG7Q13046 419 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 GGNQ86UU5 652 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 LEAP2Q969E1 77 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 IL19Q9UHD0 177 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 SONP18583 2426 aaKnown RBP9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 HIST1H1EP10412 219 aaKnown RBP9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 C1QL2Q7Z5L3 287 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 OR4F17Q8NGA8 305 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 DIRC2Q96SL1 478 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 AMMECR1Q9Y4X0 333 aaPredicted RBP9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 SCN8AQ9UQD0 1980 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 HEATR5AQ86XA9 2040 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 CA11O75493 328 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 KBTBD11O94819 623 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 HBZP02008 142 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 NMUP48645 174 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 SLC25A34Q6PIV7 304 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 OR4S2Q8NH73 311 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 FGFBP3Q8TAT2 258 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 RPRMQ9NS64 109 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 CD1BP29016 333 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
LDLRAP1-207ENST00000488127 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 HLA-DQA1P01909 254 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 EGR1P18146 543 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 ZIC4Q8N9L1 334 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 HARBI1Q96MB7 349 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 ZNF714Q96N38 554 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 SPTBN4Q9H254 2564 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 IGHV1-69-2A0A0G2JMI3 117 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 C1QTNF9BB2RNN3 333 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 SRP19P09132 144 aaKnown RBP9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 C1QTNF9P0C862 333 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 SRIP30626 198 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 RPS11P62280 158 aaKnown RBP eCLIP9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 PRR30Q53SZ7 412 aaPredicted RBP9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 TEPPQ6URK8 271 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 BIVMQ86UB2 503 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 OR1L1Q8NH94 360 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 PERPQ96FX8 193 aa9.9□□□□□ -0.82
LDLRAP1-207ENST00000488127 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 IGSF23A1L1A6 192 aa9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 SNRPCP09234 159 aaKnown RBP9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 RPL7P18124 248 aaKnown RBP9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 APOBEC3AP31941 199 aaPredicted RBP9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 MMDQ15546 238 aa9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 MDS2Q8NDY4 140 aa9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 FLYWCH2Q96CP2 140 aaKnown RBP9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 MYLKQ15746 1914 aa9.9□□□□□ -0.83
LDLRAP1-207ENST00000488127 FABP2P12104 132 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 NPY1RP25929 384 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 CDKN1AP38936 164 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 REG4Q9BYZ8 158 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 FOXD3Q9UJU5 478 aaPredicted RBP9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 B9A039 149 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 CBLN1P23435 193 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 RIGQ13278 110 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 PEAR1Q5VY43 1037 aaPredicted RBP9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 FDX2Q6P4F2 183 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 CALHM1Q8IU99 346 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 ASCL3Q9NQ33 180 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 C2orf16Q68DN1 1984 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 TLN1Q9Y490 2541 aaKnown RBP9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 hCG_38984A0A1B0GV85 526 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 ODAMA1E959 279 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 COLCA2A8K830 154 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
LDLRAP1-207ENST00000488127 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms