RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNHIT6Q9NWK9 470 aaKnown RBP0.19□□□□□ -2.38
SMC4-219ENST00000487747 LAMA4Q16363 1823 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 FLT4P35916 1363 aa0.19□□□□□ -2.38
SMC4-219ENST00000487747 COL4A5P29400 1685 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 C5orf49A4QMS7 147 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 FTCDNL1E5RQL4 147 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 F8VZ95 297 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 ATP8B1O43520 1251 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 TRGC1P0CF51 173 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 JOSD1Q15040 202 aaPredicted RBP0.18□□□□□ -2.38
SMC4-219ENST00000487747 SAPCD1Q5SSQ6 148 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 FAM27BQ5VT28 67 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 RASSF6Q6ZTQ3 369 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 DHFR2Q86XF0 187 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 ATP6V1C2Q8NEY4 427 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 OR8B3Q8NGG8 313 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 SGMS2Q8NHU3 365 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 ASB13Q8WXK3 278 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 C12orf43Q96C57 262 aaKnown RBP0.18□□□□□ -2.38
SMC4-219ENST00000487747 LRRC45Q96CN5 670 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 GNPNAT1Q96EK6 184 aaPredicted RBP0.18□□□□□ -2.38
SMC4-219ENST00000487747 PACRGQ96M98 296 aaPredicted RBP0.18□□□□□ -2.38
SMC4-219ENST00000487747 MED10Q9BTT4 135 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 TMEM109Q9BVC6 243 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 HES4Q9HCC6 221 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 EURLQ9NYK6 297 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 SETD5Q9C0A6 1442 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 KIF24Q5T7B8 1368 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 RP1P56715 2156 aa0.18□□□□□ -2.38
SMC4-219ENST00000487747 K7ERQ8 282 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 COX7A2LO14548 114 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 GEMIN2O14893 280 aaKnown RBP0.17□□□□□ -2.38
SMC4-219ENST00000487747 YKT6O15498 198 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 STX10O60499 249 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 NSA2O95478 260 aaKnown RBP0.17□□□□□ -2.38
SMC4-219ENST00000487747 IL6P05231 212 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 MSMBP08118 114 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 HIST1H1CP16403 213 aaKnown RBP0.17□□□□□ -2.38
SMC4-219ENST00000487747 SLCO1A2P46721 670 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 HADHBP55084 474 aaKnown RBP0.17□□□□□ -2.38
SMC4-219ENST00000487747 CLDN12P56749 244 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 MGAT3Q09327 533 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 DNAL1Q4LDG9 190 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 C9orf64Q5T6V5 341 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 DNM1P34Q6PK57 102 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 FAM19A5Q7Z5A7 132 aaPredicted RBP0.17□□□□□ -2.38
SMC4-219ENST00000487747 CRLF3Q8IUI8 442 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 BOD1L2Q8IYS8 172 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 ZNF565Q8N9K5 539 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 ZNF439Q8NDP4 499 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 OR7G1Q8NGA0 311 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 TESCQ96BS2 214 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 MS4A6AQ9H2W1 248 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 NAT8Q9UHE5 227 aa0.17□□□□□ -2.38
SMC4-219ENST00000487747 TRBV10-2A0A0K0K1G8 114 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 IRGMA1A4Y4 181 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 SMLR1H3BR10 107 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 C19orf84I3L1E1 186 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 NEMFO60524 1076 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 PPBPP02775 128 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 KRT7P08729 469 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 TPM1P09493 284 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 RD3LP0DJH9 198 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 CD40LGP29965 261 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 DDTP30046 118 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 CXCR4P61073 352 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 RPL30P62888 115 aaKnown RBP0.16□□□□□ -2.38
SMC4-219ENST00000487747 TNFAIP6P98066 277 aaPredicted RBP0.16□□□□□ -2.38
SMC4-219ENST00000487747 RUNX1Q01196 453 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 TNFAIP8L3Q5GJ75 292 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 SBSNQ6UWP8 590 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 SPATA24Q86W54 205 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 C12orf29Q8N999 325 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 SPERTQ8NA61 448 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 HAVCR2Q8TDQ0 301 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 ACOT12Q8WYK0 555 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 ANKRD36BP1Q96IX9 119 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 BBS2Q9BXC9 721 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 HRASLSQ9HDD0 168 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 CHMP5Q9NZZ3 219 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 PRELID1Q9Y255 219 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 COQ4Q9Y3A0 265 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 TIMM22Q9Y584 194 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 SNURFQ9Y675 71 aa0.16□□□□□ -2.38
SMC4-219ENST00000487747 ZFC3H1O60293 1989 aaKnown RBP0.15□□□□□ -2.38
SMC4-219ENST00000487747 LOC110117498A0A087WWA1 95 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 TINCRA0A1B0GVN0 87 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 TMEM269A0A1B0GVZ9 245 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 SDCBPO00560 298 aaPredicted RBP0.15□□□□□ -2.39
SMC4-219ENST00000487747 LEPROTO15243 131 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 MSNP26038 577 aaKnown RBP0.15□□□□□ -2.39
SMC4-219ENST00000487747 REG1BP48304 166 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 FXYD2P54710 66 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 POLR2GP62487 172 aaKnown RBP eCLIP0.15□□□□□ -2.39
SMC4-219ENST00000487747 PMS2P3Q13401 168 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 SSX8Q7RTT4 187 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 CD302Q8IX05 232 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 MRPL57Q9BQC6 102 aaKnown RBP0.15□□□□□ -2.39
SMC4-219ENST00000487747 TIPINQ9BVW5 301 aa0.15□□□□□ -2.39
SMC4-219ENST00000487747 OR8D2Q9GZM6 311 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms