RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LINC00311Q8N616 119 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 AIFM2Q9BRQ8 373 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 ZNRD1Q9P1U0 126 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 TRBV23-1A0A0A0MS06 115 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 IFNA10P01566 189 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 HOXA1P49639 335 aaPredicted RBP16.64■□□□□ 0.25
HPS3-206ENST00000486530 DLX6P56179 175 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 ZNF506Q5JVG8 444 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 OR13D1Q8NGV5 346 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 CLDND2Q8NHS1 167 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 ZNF596Q8TC21 504 aa16.64■□□□□ 0.25
HPS3-206ENST00000486530 RCC1LQ96I51 464 aaKnown RBP16.64■□□□□ 0.25
HPS3-206ENST00000486530 APOA2P02652 100 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 ELLP55199 621 aaPredicted RBP16.63■□□□□ 0.25
HPS3-206ENST00000486530 RPS16P62249 146 aaKnown RBP16.63■□□□□ 0.25
HPS3-206ENST00000486530 TMEM88Q6PEY1 159 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 PRNDQ9UKY0 176 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 CACNA1BQ00975 2339 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 MBP02144 154 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 MDKP21741 143 aaPredicted RBP16.63■□□□□ 0.25
HPS3-206ENST00000486530 GNLYP22749 145 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 UQCRFS1P47985 274 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 HSPE1P61604 102 aaKnown RBP16.63■□□□□ 0.25
HPS3-206ENST00000486530 ZNF726P1Q15940 193 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 HAGHQ16775 308 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 ZNF787Q6DD87 383 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 GGACTQ9BVM4 153 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 NPCDR1Q9BY65 106 aa16.63■□□□□ 0.25
HPS3-206ENST00000486530 UNKLQ9H9P5 680 aaKnown RBP16.63■□□□□ 0.25
HPS3-206ENST00000486530 KALRNO60229 2985 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 A0A087X0M5 115 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 A0A1B0GX30 115 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 HSPB1P04792 205 aaKnown RBP16.62■□□□□ 0.25
HPS3-206ENST00000486530 IL6RP08887 468 aaPredicted RBP16.62■□□□□ 0.25
HPS3-206ENST00000486530 C4orf17Q53FE4 359 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 CBLN2Q8IUK8 224 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 ZNF709Q8N972 641 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 OR10X1Q8NGY0 326 aa16.62■□□□□ 0.25
HPS3-206ENST00000486530 MRPL20Q9BYC9 149 aaKnown RBP16.62■□□□□ 0.25
HPS3-206ENST00000486530 C17orf112F2Z3M2 114 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 J3QR06 171 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 IGKV1-16P04430 117 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 OR13C7P0DN81 318 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ATF4P18848 351 aaPredicted RBP16.61■□□□□ 0.25
HPS3-206ENST00000486530 RAB11AP62491 216 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ICAM4Q14773 271 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 KHDC3LQ587J8 217 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ETV3LQ6ZN32 361 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 OSR1Q8TAX0 266 aaPredicted RBP16.61■□□□□ 0.25
HPS3-206ENST00000486530 TMEM186Q96B77 213 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ENY2Q9NPA8 101 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 IGHV2-70P01814 119 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 COL8A2P25067 703 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 CD1BP29016 333 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 SOHLH1Q5JUK2 328 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ACSM6Q6P461 480 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 LCN15Q6UWW0 184 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 WDR83OSQ9Y284 106 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 ZNF257Q9Y2Q1 563 aa16.61■□□□□ 0.25
HPS3-206ENST00000486530 LOC102723971A0A1B0GUV8 181 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 LOC105371267A0A1B0GV96 52 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 MAP1LC3B2A6NCE7 125 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 H0YJW9 148 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 UPK2O00526 184 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 SSX7Q7RTT5 188 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 OR5AN1Q8NGI8 311 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 MAP1LC3BQ9GZQ8 125 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 RALYQ9UKM9 306 aaKnown RBP16.6■□□□□ 0.25
HPS3-206ENST00000486530 OR51B2Q9Y5P1 312 aa16.6■□□□□ 0.25
HPS3-206ENST00000486530 SMG1Q96Q15 3661 aaKnown RBP16.59■□□□□ 0.25
HPS3-206ENST00000486530 PRSS46E5RG02 174 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 LYNX1G3V0Z9 82 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 RRHO14718 337 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 MPDU1O75352 247 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 SRP19P09132 144 aaKnown RBP16.59■□□□□ 0.25
HPS3-206ENST00000486530 IGHV1-8P0DP01 117 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 LYNX1P0DP58 116 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 ZNF137PP52743 207 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 OR9G1Q8NH87 305 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 RAB1BQ9H0U4 201 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 SOX15O60248 233 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 DLK1P80370 383 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 FFAR4Q5NUL3 377 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 ABHD12Q8N2K0 398 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 RPP25LQ8N5L8 163 aaKnown RBP16.59■□□□□ 0.25
HPS3-206ENST00000486530 SLC24A4Q8NFF2 622 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 RXFP4Q8TDU9 374 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 CBLN4Q9NTU7 201 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 FKBP11Q9NYL4 201 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 GNG13Q9P2W3 67 aa16.59■□□□□ 0.25
HPS3-206ENST00000486530 SRRM4A7MD48 611 aaKnown RBP16.58■□□□□ 0.24
HPS3-206ENST00000486530 H7C2Y5 167 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 IGKV1D-33P01593 117 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 IGKV1-33P01594 117 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 BCL2P10415 239 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 HNF4GQ14541 408 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 TMEM177Q53S58 311 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 AWAT1Q58HT5 328 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 PDPNQ86YL7 162 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms