RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 TAS2R8Q9NYW2 309 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 SELENOKQ9Y6D0 94 aa8.02□□□□□ -1.13
HMGN1-215ENST00000485550 TRBV9A0A0B4J1U6 114 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 FAM223BA6NKX1 122 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 PPP5D1E7EU14 171 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 E7EUB6 86 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 BMPR1BO00238 502 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 SSX5O60225 188 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 IGHV3-23P01764 117 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
HMGN1-215ENST00000485550 MYOD1P15172 320 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 CD36P16671 472 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 EDN2P20800 178 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 GALP22466 123 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 SDC2P34741 201 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 GABARAPL2P60520 117 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 CNIH2Q6PI25 160 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 SSX9Q7RTT3 188 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 GTSCR1Q86UQ5 136 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 FAM223AQ8IWN6 122 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 Q8N402 240 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 MFSD4AQ8N468 514 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 TTC9CQ8N5M4 171 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 OR5H6Q8NGV6 325 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 FYTTD1Q96QD9 318 aaKnown RBP8.01□□□□□ -1.13
HMGN1-215ENST00000485550 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 PEMTQ9UBM1 199 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 SSR3Q9UNL2 185 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 MRPS7Q9Y2R9 242 aaKnown RBP8.01□□□□□ -1.13
HMGN1-215ENST00000485550 S4R3C0 116 aa8.01□□□□□ -1.13
HMGN1-215ENST00000485550 TRAV18A0A075B6X5 111 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 DPPA5A6NC42 116 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 A8MZ25 164 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 TNFSF12O43508 249 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 CREBL2O60519 120 aaPredicted RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 MRPS14O60783 128 aaKnown RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 OR2A4O95047 310 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 OR2C1O95371 312 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 IFNA6P05013 189 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 IL6RP08887 468 aaPredicted RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 FGF9P31371 208 aaPredicted RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 BRWD1-AS2P59051 145 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 C15orf32Q32M92 178 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 CD300EQ496F6 205 aaPredicted RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 LCN12Q6JVE5 192 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 SFXN4Q6P4A7 337 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 TPRA1Q86W33 373 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 GVQW1Q8N7I0 195 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 OR2A7Q96R45 310 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 THAP7Q9BT49 309 aaPredicted RBP8□□□□□ -1.13
HMGN1-215ENST00000485550 PLEKHA3Q9HB20 300 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 RETNQ9HD89 108 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 CCL28Q9NRJ3 127 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 RHBDL2Q9NX52 303 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 ANXA10Q9UJ72 324 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 FBXL7Q9UJT9 491 aa8□□□□□ -1.13
HMGN1-215ENST00000485550 LOC100506127A0A0U1RQW1 187 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 A0A1B0GW64 132 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 TEX22C9J3V5 150 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 SLC22A5O76082 557 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 KBTBD11O94819 623 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 NDUFB8O95169 186 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 ATP6V1G2O95670 118 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 CD7P09564 240 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 FCGR2CP31995 323 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 RPL27AP46776 148 aaKnown RBP7.99□□□□□ -1.13
HMGN1-215ENST00000485550 MECP2P51608 486 aaKnown RBP7.99□□□□□ -1.13
HMGN1-215ENST00000485550 ARPC4P59998 168 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 CD81P60033 236 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 IDNKQ5T6J7 187 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 SLC25A42Q86VD7 318 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 NECAP1Q8NC96 275 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 OR4S2Q8NH73 311 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 TMEM167AQ8TBQ9 72 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 DYNLRB2Q8TF09 96 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 SECTM1Q8WVN6 248 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 LINC00476Q8WZB0 136 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 HSD17B10Q99714 261 aaKnown RBP7.99□□□□□ -1.13
HMGN1-215ENST00000485550 FAM110AQ9BQ89 295 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 SIGLEC8Q9NYZ4 499 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 DMRT1Q9Y5R6 373 aa7.99□□□□□ -1.13
HMGN1-215ENST00000485550 MUC4Q99102 2169 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 ZNF785A8K8V0 405 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 AIREO43918 545 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 SCGNO76038 276 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 LY6G6CO95867 125 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 REG1AP05451 166 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 FOLR2P14207 255 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 AREGP15514 252 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 FXYD4P59646 89 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 EIF4EBP1Q13541 118 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-215ENST00000485550 GUCA2BQ16661 112 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 DEFB114Q30KQ6 69 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 CLEC19AQ6UXS0 136 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
HMGN1-215ENST00000485550 DEFB125Q8N687 156 aa7.98□□□□□ -1.13
HMGN1-215ENST00000485550 VSTM2AQ8TAG5 236 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms