RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GNG7O60262 68 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 NXPH3O95157 252 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV1-46P01743 117 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 C4BPBP20851 252 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PAX6P26367 422 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 VEGFCP49767 419 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 TCTAP57738 103 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PAX8Q06710 450 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 GAGE5Q13069 117 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 GAGE6Q13070 117 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 MLANAQ16655 118 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 RSPO1Q2MKA7 263 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 HMGN2P46Q86SG4 172 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ODF3L1Q8IXM7 274 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 GAPTQ8N292 157 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR4X1Q8NH49 305 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 CLDND2Q8NHS1 167 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 C8orf46Q8TAG6 207 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 RNASE7Q9H1E1 156 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 KAAG1Q9UBP8 84 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 CARHSP1Q9Y2V2 147 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR2W1Q9Y3N9 320 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 DYSFO75923 2080 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 TACC2O95359 2948 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 IGKV1D-43A0A0B4J1Z2 117 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 H7C1H1 209 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 SCO1O75880 301 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 MSMBP08118 114 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF32P17041 273 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 CXCL3P19876 107 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 SLC2A5P22732 501 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 HRH1P35367 487 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 SUB1P53999 127 aaKnown RBP eCLIP4.23□□□□□ -1.73
CCDC39-205ENST00000485055 APOC4P55056 127 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 PPP1CBP62140 327 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 BAMBIQ13145 260 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 GNMTQ14749 295 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 RDH10Q8IZV5 341 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OR4S2Q8NH73 311 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 KLF14Q8TD94 323 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-205ENST00000485055 PTX4Q96A99 478 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-205ENST00000485055 REEP6Q96HR9 211 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OR5M11Q96RB7 305 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 KCTD14Q9BQ13 255 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-205ENST00000485055 BPESC1Q9GZL8 116 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 VSIRQ9H7M9 311 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 RPL36Q9Y3U8 105 aaKnown RBP4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OR51B2Q9Y5P1 312 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 A0A087WZ39 114 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV1-69-2A0A0G2JMI3 117 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 CDC42EP2O14613 210 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 LHBP01229 141 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 IGLV3-1P01715 115 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 COL8A2P25067 703 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 GGT2P36268 569 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 TAS2R43P59537 309 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 GNG5P63218 68 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 ARL16Q0P5N6 197 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 GLYATQ6IB77 296 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 SLC18B1Q6NT16 456 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF620Q6ZNG0 422 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OAFQ86UD1 273 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF383Q8NA42 475 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OR4M1Q8NGD0 313 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 OR1J1Q8NGS3 322 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 STMN2Q93045 179 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 SLC25A38Q96DW6 304 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 KIR2DL4Q99706 377 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 EMC6Q9BV81 110 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 TAAR3PQ9P1P4 343 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 COPZ2Q9P299 210 aa4.23□□□□□ -1.73
CCDC39-205ENST00000485055 RP1L1Q8IWN7 2480 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-205ENST00000485055 LINC00473A8K010 186 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 CLDN25C9JDP6 229 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TNFRSF11BO00300 401 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 SOX15O60248 233 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 OPN1SWP03999 348 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TFAP2AP05549 437 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 CD37P11049 281 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 GPR6P46095 362 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF85Q03923 595 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TEX36Q5VZQ5 186 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 Q6ZRM9 215 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 Q6ZVQ6 151 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 RGP1Q92546 391 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM203Q969S6 136 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 DOK5Q9P104 306 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 LSM5Q9Y4Y9 91 aaKnown RBP4.22□□□□□ -1.73
CCDC39-205ENST00000485055 LHFPL6Q9Y693 200 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 CREBBPQ92793 2442 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 ABCA2Q9BZC7 2435 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 C15orf61A6NNL5 157 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TRAPPC2LH3BP13 241 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 SLC17A3O00476 420 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 CD79AP11912 226 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 DEFA3P59666 94 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms