RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 TMEM272A0A1B0GTI8 110 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 UBE2CO00762 179 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 MYL12BO14950 172 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 REG1AP05451 166 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
UBR4-213ENST00000483922 PSMB6P28072 239 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 CBX3Q13185 183 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
UBR4-213ENST00000483922 ZNF124Q15973 351 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 OR1L6Q8NGR2 347 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 FAM3DQ96BQ1 224 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 ADTRPQ96IZ2 230 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 FYTTD1Q96QD9 318 aaKnown RBP9.48□□□□□ -0.89
UBR4-213ENST00000483922 OR51E2Q9H255 320 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 MAP6D1Q9H9H5 199 aa9.48□□□□□ -0.89
UBR4-213ENST00000483922 KIR2DL5BA0A0G2JN68 375 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 KIR2DL5BA0A0G2JPC4 375 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 MFNGO00587 321 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 GNB3P16520 340 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 APOC4P55056 127 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 TPBGQ13641 420 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 SLC25A42Q86VD7 318 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 KIR2DL5AQ8N109 375 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 BPIFB6Q8NFQ5 453 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 OR56B1Q8NGI3 324 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 TMEM167AQ8TBQ9 72 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 KRTAP4-5Q9BYR2 181 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 PLGRKTQ9HBL7 147 aa9.47□□□□□ -0.89
UBR4-213ENST00000483922 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
UBR4-213ENST00000483922 IGKV1D-13A0A0B4J2D9 117 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 RAB27BO00194 218 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 TSPAN4O14817 238 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 DENRO43583 198 aaKnown RBP9.46□□□□□ -0.9
UBR4-213ENST00000483922 ACTL6BO94805 426 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 DIRAS3O95661 229 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.9
UBR4-213ENST00000483922 RAB11BQ15907 218 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 OR4A47Q6IF82 309 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
UBR4-213ENST00000483922 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 ZNF502Q8TBZ5 544 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 EEF1AKMT3Q96AZ1 226 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 RAB3CQ96E17 227 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 OR2A7Q96R45 310 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 DCUN1D5Q9BTE7 237 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 ZNF436Q9C0F3 470 aaPredicted RBP9.46□□□□□ -0.9
UBR4-213ENST00000483922 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
UBR4-213ENST00000483922 RBM7Q9Y580 266 aaKnown RBP9.46□□□□□ -0.9
UBR4-213ENST00000483922 HSPG2P98160 4391 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 KBTBD11O94819 623 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 HLA-DQB1P01920 261 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 RPA2P15927 270 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 GPR183P32249 361 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 RPS25P62851 125 aaKnown RBP9.45□□□□□ -0.9
UBR4-213ENST00000483922 SPHARQ15513 63 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 Q6ZS49 121 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 DHRSXQ8N5I4 330 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 ZNF645Q8N7E2 425 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 OR5B3Q8NH48 314 aa9.45□□□□□ -0.9
UBR4-213ENST00000483922 SPAG8Q99932 426 aaPredicted RBP9.45□□□□□ -0.9
UBR4-213ENST00000483922 RBMX2Q9Y388 322 aaKnown RBP9.45□□□□□ -0.9
UBR4-213ENST00000483922 A0A075B6Q4 140 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 TRAV3A0A0B4J244 114 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 GALP22466 123 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 NFYAP23511 347 aaPredicted RBP9.44□□□□□ -0.9
UBR4-213ENST00000483922 ELLP55199 621 aaPredicted RBP9.44□□□□□ -0.9
UBR4-213ENST00000483922 ARFRP1Q13795 201 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 IRF3Q14653 427 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 HES5Q5TA89 166 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 KCTD9Q7L273 389 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 OR10R2Q8NGX6 335 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 MARC2Q969Z3 335 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 GINS4Q9BRT9 223 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 RAB22AQ9UL26 194 aa9.44□□□□□ -0.9
UBR4-213ENST00000483922 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
UBR4-213ENST00000483922 DEFB4AO15263 64 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 CREBL2O60519 120 aaPredicted RBP9.43□□□□□ -0.9
UBR4-213ENST00000483922 HIST1H1DP16402 221 aaKnown RBP9.43□□□□□ -0.9
UBR4-213ENST00000483922 OR2B8PP59922 312 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 FABP5Q01469 135 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 ZNF773Q6PK81 442 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 SSX9Q7RTT3 188 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 SLC38A6Q8IZM9 456 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 TMEM217Q8N7C4 229 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 MND1Q9BWT6 205 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 FBXL17Q9UF56 701 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms