RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SLC31A2O15432 143 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 SSSCA1O60232 199 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 FCGR3BO75015 233 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 MMP23AO75900 390 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 S1PR2O95136 353 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 LIPFP07098 398 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 SAA2P0DJI9 122 aaPredicted RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 CT45A6P0DMU7 189 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 CT45A5P0DMU8 189 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 CT45A7P0DMV0 189 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 IGHV1-8P0DP01 117 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 NFYBP25208 207 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 IL3RAP26951 378 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 G6PCP35575 357 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 LGALS7P47929 136 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 CAV2P51636 162 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ERVK-16P61578 105 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 GNB2P62879 340 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 HBG1P69891 147 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 HBG2P69892 147 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF273Q14593 569 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 LTC4SQ16873 150 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 RTL8BQ17RB0 113 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 RPL39P5Q59GN2 51 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 UQCC3Q6UW78 93 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM14EPQ6UXP3 125 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 C1orf229Q6ZS94 237 aaPredicted RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 LYG1Q8N1E2 194 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ABHD12Q8N2K0 398 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF383Q8NA42 475 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 OR8B3Q8NGG8 313 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 OR4A5Q8NH83 315 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 LYPD6BQ8NI32 183 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 H1FXQ92522 213 aaKnown RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ST6GALNAC6Q969X2 333 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 R3HDM4Q96D70 268 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 OR8B2Q96RD0 313 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TSNAXQ99598 290 aaKnown RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 RNF5Q99942 180 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 GGACTQ9BVM4 153 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 REG4Q9BYZ8 158 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 MAGT1Q9H0U3 335 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM133Q9H2Q1 129 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 PATZ1Q9HBE1 687 aaKnown RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 BARX1Q9HBU1 254 aaPredicted RBP4.41□□□□□ -1.7
COL17A1-206ENST00000483876 WFDC1Q9HC57 220 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 PARP11Q9NR21 331 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 FKBP11Q9NYL4 201 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 PSENENQ9NZ42 101 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF257Q9Y2Q1 563 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 SESN1Q9Y6P5 492 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 PPIAL4CA0A0B4J2A2 164 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 A0A1W2PPR1 153 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 IGSF23A1L1A6 192 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 KRBOX1C9JBD0 128 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 RNF223E7ERA6 249 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 INS-IGF2F8WCM5 200 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 M0R1W7 72 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 SOX15O60248 233 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 IFNA5P01569 189 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 IGLV1-47P01700 117 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 PPIAL4GP0DN37 164 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 CCL3L1P16619 93 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 EPHA1P21709 976 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 HSPE1P61604 102 aaKnown RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 SERF2P84101 59 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 RELBQ01201 579 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 ZNF816Q0VGE8 651 aaPredicted RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 PRAMEF5Q5TYX0 476 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 TREML4Q6UXN2 200 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 DPPA3Q6W0C5 159 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 CENPVQ7Z7K6 275 aaPredicted RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 COMMD7Q86VX2 200 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 PDPNQ86YL7 162 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 COMMD1Q8N668 190 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 OR4C13Q8NGP0 309 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 OR1S2Q8NGQ3 325 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 OR5C1Q8NGR4 320 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 OR4A16Q8NH70 328 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 DTD1Q8TEA8 209 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 TMED6Q8WW62 240 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 LHX4Q969G2 390 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 MARC2Q969Z3 335 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 RHOVQ96L33 236 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 ATP5SQ99766 215 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 RBKSQ9H477 322 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM14BQ9NUH8 114 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 PRNDQ9UKY0 176 aa4.4□□□□□ -1.71
COL17A1-206ENST00000483876 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms