RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PGLYRP1O75594 196 aaPredicted RBP20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 FAUP35544 74 aaKnown RBP20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 PHLDA2Q53GA4 152 aa20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 TERB2Q8NHR7 220 aa20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 DEDD2Q8WXF8 326 aa20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 ZNF430Q9H8G1 570 aaPredicted RBP20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 SLC2A8Q9NY64 477 aa20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 FOXA2Q9Y261 457 aaPredicted RBP20.68■□□□□ 0.9
GTF3C4-202ENST00000483873 TMEM267Q0VDI3 215 aaPredicted RBP20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 TNXAQ16473 311 aa20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 ETV3LQ6ZN32 361 aa20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 SSX9Q7RTT3 188 aa20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 OR13C8Q8NGS7 320 aa20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 RSRP1Q9BUV0 290 aa20.67■□□□□ 0.9
GTF3C4-202ENST00000483873 RBFOX2O43251 390 aaKnown RBP eCLIP20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 UCP3P55916 312 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 AKIRIN2Q53H80 203 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 ZNF695Q8IW36 515 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 CMTM1Q8IZ96 169 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 PUSL1Q8N0Z8 303 aaKnown RBP20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 MYOZ3Q8TDC0 251 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 RHOVQ96L33 236 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 PRRT1Q99946 306 aa20.66■□□□□ 0.9
GTF3C4-202ENST00000483873 PF4P02776 101 aa20.65■□□□□ 0.9
GTF3C4-202ENST00000483873 KIAA0141Q14154 515 aaPredicted RBP20.65■□□□□ 0.9
GTF3C4-202ENST00000483873 C10orf55Q5SWW7 151 aa20.65■□□□□ 0.9
GTF3C4-202ENST00000483873 ASPHD1Q5U4P2 390 aa20.65■□□□□ 0.9
GTF3C4-202ENST00000483873 TCTEX1D1Q8N7M0 179 aa20.65■□□□□ 0.9
GTF3C4-202ENST00000483873 PLA2G10O15496 165 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 UPK1BO75841 260 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 KBTBD11O94819 623 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 S1PR2O95136 353 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 HRASP01112 189 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 APELAP0DMC3 54 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 CDX1P47902 265 aaPredicted RBP20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 TMEM65Q6PI78 240 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 MARCH1Q8TCQ1 289 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 DUX3Q96PT4 197 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 SCP2D1Q9UJQ7 156 aa20.64■□□□□ 0.89
GTF3C4-202ENST00000483873 OR2A4O95047 310 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 HPRT1P00492 218 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 PGAM2P15259 253 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 RAB9AP51151 201 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 IFITM3Q01628 133 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 DEFB136Q30KP8 78 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 LPCAT3Q6P1A2 487 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 MMD2Q8IY49 270 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 SLC38A6Q8IZM9 456 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 POC5Q8NA72 575 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 SRSF12Q8WXF0 261 aaKnown RBP20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 OR2A7Q96R45 310 aa20.63■□□□□ 0.89
GTF3C4-202ENST00000483873 F2RP25116 425 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 OR4A47Q6IF82 309 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 ZNF491Q8N8L2 437 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 VSTM2AQ8TAG5 236 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 TMEM167AQ8TBQ9 72 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 TSC22D3Q99576 134 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 GNB4Q9HAV0 340 aa20.62■□□□□ 0.89
GTF3C4-202ENST00000483873 MSGN1A6NI15 193 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 PI3P19957 117 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 TAS2R31P59538 309 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 TBC1D26Q86UD7 250 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 OR5T1Q8NG75 326 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 OR5M8Q8NGP6 311 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 CD300LFQ8TDQ1 290 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 RAX2Q96IS3 184 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 MS4A10Q96PG2 267 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 PHB2Q99623 299 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 C7orf50Q9BRJ6 194 aaKnown RBP20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 PLEKHA2Q9HB19 425 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 NAP1L6A6NFF2 107 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 CREBL2O60519 120 aaPredicted RBP20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 RPA2P15927 270 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 BTCP35070 178 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 ZNF585BQ52M93 769 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 C1QL4Q86Z23 238 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 SLC2A9Q9NRM0 540 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 TBC1D24Q9ULP9 559 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 NOTCH1P46531 2555 aa20.61■□□□□ 0.89
GTF3C4-202ENST00000483873 MEGF8Q7Z7M0 2845 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 ACTL6BO94805 426 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 MYOD1P15172 320 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 NQO2P16083 231 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 SLC6A1P30531 599 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 ECI1P42126 302 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 LPAR6P43657 344 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 CCR6P51684 374 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 POU2AF1Q16633 256 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 C4orf3Q8WVX3 66 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 UBE2E2Q96LR5 201 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 OR5B12Q96R08 314 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 BET1LQ9NYM9 111 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 COMMD9Q9P000 198 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 GPR132Q9UNW8 380 aa20.6■□□□□ 0.89
GTF3C4-202ENST00000483873 TRAV3A0A0B4J244 114 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 CENPXA8MT69 81 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 G3V4G9 280 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 LYRM1O43325 122 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 CD33P20138 364 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 SURF2Q15527 256 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms