RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 ACTL6BO94805 426 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 KRASP01116 189 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 IL7P13232 177 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 CHRNA7P36544 502 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 SURF2Q15527 256 aaPredicted RBP13.64□□□□□ -0.23
DDR1-243ENST00000482050 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 MMD2Q8IY49 270 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 SGMS2Q8NHU3 365 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 TMEM167AQ8TBQ9 72 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 CASTOR1Q8WTX7 329 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 TP53RKQ96S44 253 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 C5orf66Q9H5L9 145 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 GPR132Q9UNW8 380 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 VSIG4Q9Y279 399 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 NUBP2Q9Y5Y2 271 aa13.64□□□□□ -0.23
DDR1-243ENST00000482050 TRAV3A0A0B4J244 114 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 M0QZ24 198 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 CREBL2O60519 120 aaPredicted RBP13.63□□□□□ -0.23
DDR1-243ENST00000482050 TSPAN15O95858 294 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 RPLP1P05386 114 aaKnown RBP13.63□□□□□ -0.23
DDR1-243ENST00000482050 MYOD1P15172 320 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 G6PCP35575 357 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 CRIP2P52943 208 aaPredicted RBP13.63□□□□□ -0.23
DDR1-243ENST00000482050 ERVK-16P61578 105 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 SP6Q3SY56 376 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 TCTEX1D1Q8N7M0 179 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
DDR1-243ENST00000482050 SRSF12Q8WXF0 261 aaKnown RBP13.63□□□□□ -0.23
DDR1-243ENST00000482050 PHB2Q99623 299 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 AIFM2Q9BRQ8 373 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 ZNF580Q9UK33 172 aa13.63□□□□□ -0.23
DDR1-243ENST00000482050 TEX13DA0A0J9YY54 714 aaPredicted RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 C3orf85A0A1B0GTC6 90 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 MSGN1A6NI15 193 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 MARCH11A6NNE9 402 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 H0Y980 276 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 SOX15O60248 233 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 IGKV1-39P01597 117 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 IGHG4P01861 327 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 OPN1MWP04001 364 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 IGKV1D-39P04432 117 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 SERPINE2P07093 398 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 PF4V1P10720 104 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 TMEM267Q0VDI3 215 aaPredicted RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 FOXE3Q13461 319 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 POU2AF1Q16633 256 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 C2orf68Q2NKX9 166 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 C19orf54Q5BKX5 351 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 CXorf66Q5JRM2 361 aaPredicted RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 C18orf65Q6ZTR6 163 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 NDUFA11Q86Y39 141 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 COMMD1Q8N668 190 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 MINDY2Q8NBR6 621 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 KLK15Q9H2R5 256 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 BET1LQ9NYM9 111 aa13.62□□□□□ -0.23
DDR1-243ENST00000482050 FOXA2Q9Y261 457 aaPredicted RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
DDR1-243ENST00000482050 UPK2O00526 184 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 CCR6P51684 374 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 RPL8P62917 257 aaKnown RBP13.61□□□□□ -0.23
DDR1-243ENST00000482050 TRIM16LQ309B1 348 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 AKIRIN2Q53H80 203 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 OR5T1Q8NG75 326 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 FAM110DQ8TAY7 271 aaPredicted RBP13.61□□□□□ -0.23
DDR1-243ENST00000482050 S100ZQ8WXG8 99 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 SCGB3A2Q96PL1 93 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
DDR1-243ENST00000482050 NUDT19A8MXV4 375 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 ELANEP08246 267 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 AKR1C4P17516 323 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 HLA-GP17693 338 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 RPL23AP62750 156 aaKnown RBP13.6□□□□□ -0.23
DDR1-243ENST00000482050 ASPHD1Q5U4P2 390 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 TMED4Q7Z7H5 227 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 OR4A5Q8NH83 315 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 DEDD2Q8WXF8 326 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 TMEM230Q96A57 120 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 MS4A10Q96PG2 267 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 FYTTD1Q96QD9 318 aaKnown RBP13.6□□□□□ -0.23
DDR1-243ENST00000482050 ZNF355PQ9NSJ1 428 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 FAM212BQ9NTI7 297 aaPredicted RBP13.6□□□□□ -0.23
DDR1-243ENST00000482050 NSG2Q9Y328 171 aa13.6□□□□□ -0.23
DDR1-243ENST00000482050 TNCP24821 2201 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 HMX3A6NHT5 357 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 CRYM-AS1A6NIL9 109 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 E7EUB6 86 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 IGLV1-40P01703 118 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 PSMB8P28062 276 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
DDR1-243ENST00000482050 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
DDR1-243ENST00000482050 A0A1B0GW64 132 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms