RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 GGTLC3B5MD39 225 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 LY6HO94772 140 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 NDUFB2O95178 105 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 IFNA1P01562 189 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 CRHBPP24387 322 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 SERPINB10P48595 397 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 LINC00315P59091 139 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 CST6Q15828 149 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 SMARCD3Q6STE5 483 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 EIF4E3Q8N5X7 224 aaKnown RBP3.06□□□□□ -1.92
COPA-203ENST00000481040 RNF182Q8N6D2 247 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 Q8NAQ8 132 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 MUC7Q8TAX7 377 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 KLF6Q99612 283 aaPredicted RBP3.06□□□□□ -1.92
COPA-203ENST00000481040 MND1Q9BWT6 205 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 SMDT1Q9H4I9 107 aa3.06□□□□□ -1.92
COPA-203ENST00000481040 BAZ1AQ9NRL2 1556 aaPredicted RBP3.06□□□□□ -1.92
COPA-203ENST00000481040 DOCK3Q8IZD9 2030 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 CACNA1SQ13698 1873 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 RALGAPA2Q2PPJ7 1873 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 COL18A1P39060 1754 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 ROBO3Q96MS0 1386 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 TRBV20OR9-2A0A075B6H5 130 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 A0A1B0GU33 70 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 A0A1W2PQ67 120 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 C19orf71A6NCJ1 209 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 OR11H12B2RN74 326 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 ATG12O94817 140 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 SERPINE1P05121 402 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 GABRA2P47869 451 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 CRYBA4P53673 196 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 TAS2R41P59536 307 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 C12orf74Q32Q52 190 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 C9orf64Q5T6V5 341 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 SMIM15Q7Z3B0 74 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 SH2D6Q7Z4S9 175 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 ZNF283Q8N7M2 679 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 OR11H2Q8NH07 326 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 WDR61Q9GZS3 305 aaKnown RBP3.05□□□□□ -1.92
COPA-203ENST00000481040 DUSP21Q9H596 190 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 C16orf95Q9H693 158 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 CISHQ9NSE2 258 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 UTP11Q9Y3A2 253 aaKnown RBP3.05□□□□□ -1.92
COPA-203ENST00000481040 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 PRR14LQ5THK1 2151 aa3.05□□□□□ -1.92
COPA-203ENST00000481040 ABCC12Q96J65 1359 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 ANKRD30AQ9BXX3 1397 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 OR5K4A6NMS3 321 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 SRP19P09132 144 aaKnown RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 ZNF705DP0CH99 300 aaPredicted RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 RPL27AP46776 148 aaKnown RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 RAB13P51153 203 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 HSPE1P61604 102 aaKnown RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 HTR4Q13639 388 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 NOXRED1Q6NXP6 359 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 ZNF322Q6U7Q0 402 aaPredicted RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 LYPD6Q86Y78 171 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 TBC1D19Q8N5T2 526 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 OR11H6Q8NGC7 330 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 OR10P1Q8NGE3 313 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 OR13C8Q8NGS7 320 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 MRPL30Q8TCC3 161 aaKnown RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 GNPDA2Q8TDQ7 276 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 PCBD2Q9H0N5 130 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 TMEM222Q9H0R3 208 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 BOLA2Q9H3K6 86 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 FBXL12Q9NXK8 326 aa3.04□□□□□ -1.92
COPA-203ENST00000481040 TRPM3Q9HCF6 1732 aaPredicted RBP3.04□□□□□ -1.92
COPA-203ENST00000481040 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 ERCC6Q03468 1493 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 LCTP09848 1927 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 KIF26AQ9ULI4 1882 aaPredicted RBP3.03□□□□□ -1.92
COPA-203ENST00000481040 RTL1A6NKG5 1358 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 IGKV6D-41A0A0C4DH26 115 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 LOC102725191A0A1B0GVB3 256 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 GRIFINA4D1Z8 144 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 C17orf51A8MQB3 221 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 I3L521 148 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 PIRO00625 290 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 SOD1P00441 154 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 RPS11P62280 158 aaKnown RBP eCLIP3.03□□□□□ -1.92
COPA-203ENST00000481040 RPL30P62888 115 aaKnown RBP3.03□□□□□ -1.92
COPA-203ENST00000481040 GNG3P63215 75 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 FAM229BQ4G0N7 80 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 WDR59Q6PJI9 974 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 TMPPEQ6ZT21 453 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 SSX8Q7RTT4 187 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 CNEP1R1Q8N9A8 125 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 ABCG5Q9H222 651 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 ASF1BQ9NVP2 202 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 R4GN34 69 aa3.03□□□□□ -1.92
COPA-203ENST00000481040 THOC2Q8NI27 1593 aaKnown RBP3.03□□□□□ -1.92
COPA-203ENST00000481040 DOCK6Q96HP0 2047 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 hCG_1818297A0A087WSY0 165 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 TMEM269A0A1B0GVZ9 245 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 A8MT66 165 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 C17orf98A8MV24 154 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms