RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 IGHV1-69P01742 117 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 APOA2P02652 100 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 GAPDHP04406 335 aaKnown RBP5.35□□□□□ -1.55
USP48-208ENST00000479177 HOXB5P09067 269 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 GIPP09681 153 aaPredicted RBP5.35□□□□□ -1.55
USP48-208ENST00000479177 P0C879 139 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 RPA2P15927 270 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 HTR1DP28221 377 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 CEACAM3P40198 252 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 LPAR6P43657 344 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 H2BFSP57053 126 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 CD300CQ08708 224 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 MIDNQ504T8 468 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 NMSQ5H8A3 153 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 GGNBP1Q5YKI7 109 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 DHRS7BQ6IAN0 325 aaPredicted RBP5.35□□□□□ -1.55
USP48-208ENST00000479177 LYZL2Q7Z4W2 148 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 RPEQ96AT9 228 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 OR2A7Q96R45 310 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 ZNF747Q9BV97 191 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 ZNF436Q9C0F3 470 aaPredicted RBP5.35□□□□□ -1.55
USP48-208ENST00000479177 PLEKHA2Q9HB19 425 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 SLC35D1Q9NTN3 355 aa5.35□□□□□ -1.55
USP48-208ENST00000479177 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 PIGBOS1A0A0B4J2F0 54 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 MPTX1A8MV57 137 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 FAM25EA8MYX2 175 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 PFDN1O60925 122 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 CRYZL1O95825 349 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 HPRT1P00492 218 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 IFNA21P01568 189 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 IGKV1-16P04430 117 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 IGHV4-38-2P0DP08 117 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 RRASP10301 218 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 VDAC1P21796 283 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 SAA4P35542 130 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 RAB13P51153 203 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 AKR1C2P52895 323 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 PTTG1IPP53801 180 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 RAP2BP61225 183 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 SRSF2Q01130 221 aaKnown RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 SRSF4Q08170 494 aaKnown RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 HABP2Q14520 560 aaPredicted RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 RTL8BQ17RB0 113 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 KLF17Q5JT82 389 aaPredicted RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 GPR157Q5UAW9 335 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 RUSC1-AS1Q66K80 236 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 CYB5R2Q6BCY4 276 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 GSG1LQ6UXU4 331 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 PDPNQ86YL7 162 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 ZNF695Q8IW36 515 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 TCTE3Q8IZS6 198 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 OR8H3Q8N146 312 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 DYNAPQ8N1N2 210 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 ASB13Q8WXK3 278 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 LSM10Q969L4 123 aaKnown RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 SEC22AQ96IW7 307 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 FYTTD1Q96QD9 318 aaKnown RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 RANGRFQ9HD47 186 aaPredicted RBP5.34□□□□□ -1.55
USP48-208ENST00000479177 WASHC3Q9Y3C0 194 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 TMED3Q9Y3Q3 217 aa5.34□□□□□ -1.55
USP48-208ENST00000479177 PLXNB1O43157 2135 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 ANK3Q12955 4377 aaKnown RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 TEP1Q99973 2627 aaKnown RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 IGHV3OR16-10A0A075B7F0 116 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 IGHV3-72A0A0B4J1Y9 119 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 C5orf51A6NDU8 294 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 MARCH11A6NNE9 402 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 G3V3Q6 166 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 TIMM23O14925 209 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 ATG12O94817 140 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 VENTXO95231 258 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 NQO2P16083 231 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 MC5RP33032 325 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 G6PCP35575 357 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 ERVK-16P61578 105 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 IL15RAQ13261 267 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 SSX2Q16385 188 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 POU2AF1Q16633 256 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 IZUMO4Q1ZYL8 232 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 IAH1Q2TAA2 248 aaPredicted RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 TOR2AQ5JU69 321 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 CCDC144NLQ6NUI1 221 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 BRD3OSQ6XYD6 125 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 MOB3BQ86TA1 216 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 FAM219AQ8IW50 185 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 ZBTB8BQ8NAP8 495 aaPredicted RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 RNASE11Q8TAA1 199 aaKnown RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 OSR1Q8TAX0 266 aaPredicted RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 GPR146Q96CH1 333 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 R3HDM4Q96D70 268 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 RBMXL1Q96E39 390 aaKnown RBP5.33□□□□□ -1.56
USP48-208ENST00000479177 MALSU1Q96EH3 234 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 OR10C1Q96KK4 312 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 C2orf50Q96LR7 162 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 HARBI1Q96MB7 349 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 SPIN2AQ99865 258 aa5.33□□□□□ -1.56
USP48-208ENST00000479177 SPIN2BQ9BPZ2 258 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms