RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 TPT1P8Q9HAU6 139 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 IFT46Q9NQC8 304 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 BIN3Q9NQY0 253 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 MED9Q9NWA0 146 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 AHSPQ9NZD4 102 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 DKKL1Q9UK85 242 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 PRELID3BQ9Y3B1 194 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 ARL5AQ9Y689 179 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 ENPP4Q9Y6X5 453 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 V9GYH0 126 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TRDV1A0A1B0GX56 115 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 OR51F1A6NGY5 319 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 H0Y8G0 127 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 PEX7O00628 323 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 PDCD5O14737 125 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 TIMM8AO60220 97 aaPredicted RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 SC5DO75845 299 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 ARL6IP5O75915 188 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 WISP3O95389 354 aaPredicted RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 APOC1P02654 83 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 IFNA4P05014 189 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 SLC2A5P22732 501 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 CXCL5P42830 114 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 TGM4P49221 684 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF140P52738 457 aaPredicted RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 PSMD4P55036 377 aaKnown RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 TSPAN5P62079 268 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 MRPS10P82664 201 aaKnown RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 CDK6Q00534 326 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 HMGCS1Q01581 520 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 STX4Q12846 297 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 BTN1A1Q13410 526 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 DDX39BQ13838 428 aaKnown RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 RGNQ15493 299 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 SGCAQ16586 387 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 NDUFAF6Q330K2 333 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 COA6Q5JTJ3 125 aaKnown RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 BCL2L15Q5TBC7 163 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 LAIR2Q6ISS4 152 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 REEP3Q6NUK4 255 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 FAM151BQ6UXP7 276 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 Q6ZT83 130 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 STX12Q86Y82 276 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 C9orf62Q8N4C0 152 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 KRTCAP2Q8N6L1 136 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 ATP6V1C2Q8NEY4 427 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 OR8J2Q8NGG1 315 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 OR13C4Q8NGS5 318 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 OR5K2Q8NHB8 316 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 SLC7A13Q8TCU3 470 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 CD200R1Q8TD46 325 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 APH1BQ8WW43 257 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 PPCDCQ96CD2 204 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 OPALINQ96PE5 141 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 TSSK6Q9BXA6 273 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 DNTTIP1Q9H147 329 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 ABCG5Q9H222 651 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 RERGLQ9H628 205 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 TMEM38AQ9H6F2 299 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 CYTL1Q9NRR1 136 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 TXNL4BQ9NX01 149 aaKnown RBP3□□□□□ -1.93
CCDC171-207ENST00000478913 SDHAF2Q9NX18 166 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 XCL2Q9UBD3 114 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 VPS29Q9UBQ0 182 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 PIGLQ9Y2B2 252 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF337Q9Y3M9 751 aa3□□□□□ -1.93
CCDC171-207ENST00000478913 SNRNP200O75643 2136 aaKnown RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 MEIKINA0A087WXM9 373 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 IGHV1-69DA0A0B4J2H0 117 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 LGALS9O00182 355 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 WRBO00258 174 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CCL22O00626 93 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 AKR7A2O43488 359 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 TGOLN2O43493 480 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CREBL2O60519 120 aaPredicted RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 HPGDSO60760 199 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 PDYNP01213 254 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 IGHV1-69P01742 117 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CATP04040 527 aaKnown RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 S100A8P05109 93 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 IL3P08700 152 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 UBBP0CG47 229 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 UBCP0CG48 685 aaKnown RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 STAG3L3P0CL85 134 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 MPC1LP0DKB6 136 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 NFYAP23511 347 aaPredicted RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 FUSP35637 526 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 TGFBR1P36897 503 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 MYCNOSP40205 109 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CRYBB2P43320 205 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 TFPI2P48307 235 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CEBPDP49716 269 aaPredicted RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 LINC00315P59091 139 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 RAB5BP61020 215 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 EIF5AP63241 154 aaKnown RBP2.99□□□□□ -1.93
CCDC171-207ENST00000478913 ACTC1P68032 377 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 CCL8P80075 99 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 DEFA5Q01523 94 aa2.99□□□□□ -1.93
CCDC171-207ENST00000478913 TPBGQ13641 420 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms