RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 C5orf52A6NGY3 159 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 VSTM5A8MXK1 200 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 UBE2CO00762 179 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 CYB5BO43169 146 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 FBP1P09467 338 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 OR4A8P0C604 315 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 SELLP14151 372 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 DAOP14920 347 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 OPRK1P41145 380 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 RND2P52198 227 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 MRPS11P82912 194 aaKnown RBP10.04□□□□□ -0.8
PTPRF-212ENST00000477970 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 C1orf87Q8N0U7 546 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 KCNIP2Q9NS61 270 aa10.04□□□□□ -0.8
PTPRF-212ENST00000477970 SMCO3A2RU48 225 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 ZFP92A6NM28 416 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 HRASP01112 189 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
PTPRF-212ENST00000477970 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 ALKBH2Q6NS38 261 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 CISD2Q8N5K1 135 aaKnown RBP10.03□□□□□ -0.8
PTPRF-212ENST00000477970 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 ISOC2Q96AB3 205 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 CCL13Q99616 98 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 TCF19Q9Y242 345 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 GYPAP02724 150 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 RAB11AP62491 216 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 RBPJQ06330 500 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 WDR25Q64LD2 544 aaPredicted RBP10.03□□□□□ -0.8
PTPRF-212ENST00000477970 ZNF833PQ6ZTB9 187 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 FAM24BQ8N5W8 94 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 NGBQ9NPG2 151 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 DYSFO75923 2080 aa10.03□□□□□ -0.8
PTPRF-212ENST00000477970 PSMB3P49720 205 aa10.02□□□□□ -0.8
PTPRF-212ENST00000477970 FGF8P55075 233 aaPredicted RBP10.02□□□□□ -0.8
PTPRF-212ENST00000477970 CD81P60033 236 aa10.02□□□□□ -0.8
PTPRF-212ENST00000477970 DUX4L9Q6RFH8 374 aaPredicted RBP10.02□□□□□ -0.8
PTPRF-212ENST00000477970 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.8
PTPRF-212ENST00000477970 LOC400499M0QZD8 3231 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
PTPRF-212ENST00000477970 ELOBQ15370 118 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 OR4A47Q6IF82 309 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
PTPRF-212ENST00000477970 PRNDQ9UKY0 176 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 TMEM178BH3BS89 294 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 TGOLN2O43493 480 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 IGHV2-5P01817 119 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 TLE1Q04724 770 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
PTPRF-212ENST00000477970 ATMQ13315 3056 aa10.02□□□□□ -0.81
PTPRF-212ENST00000477970 EFNB3Q15768 340 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 LINC00311Q8N616 119 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 TMEM170AQ8WVE7 144 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 RAB24Q969Q5 203 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 TXNDC17Q9BRA2 123 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 HEYLQ9NQ87 328 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-212ENST00000477970 KAAG1Q9UBP8 84 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 KBTBD11O94819 623 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 FSTL3O95633 263 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 UTF1Q5T230 341 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 OR13D1Q8NGV5 346 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 SNRNP40Q96DI7 357 aaKnown RBP10.01□□□□□ -0.81
PTPRF-212ENST00000477970 RHOVQ96L33 236 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 HCFC1P51610 2035 aa10.01□□□□□ -0.81
PTPRF-212ENST00000477970 USF3Q68DE3 2245 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 INS-IGF2F8WCM5 200 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 IFNA10P01566 189 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
PTPRF-212ENST00000477970 RTL8BQ17RB0 113 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 NCMAPQ5T1S8 102 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 LYG1Q8N1E2 194 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 SLC25A22Q9H936 323 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 SLC25A10Q9UBX3 287 aaPredicted RBP10□□□□□ -0.81
PTPRF-212ENST00000477970 PRR14LQ5THK1 2151 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 PPIAL4EA0A075B759 164 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 TRAV3A0A0B4J244 114 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 hCG_1809904A0A1W2PP81 198 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 A0A1W2PR64 198 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 A0A1W2PRV1 198 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 PPIAL4DF5H284 164 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 CT45A6P0DMU7 189 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 CT45A5P0DMU8 189 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 CT45A7P0DMV0 189 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 PPIAL4FP0DN26 164 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 PPIAL4AQ9Y536 164 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 UPK2O00526 184 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 RRHO14718 337 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 SPINK9Q5DT21 86 aa10□□□□□ -0.81
PTPRF-212ENST00000477970 SSX9Q7RTT3 188 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms