RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TPSG1Q9NRR2 321 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 SHPKQ9UHJ6 478 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 SIGLEC9Q9Y336 463 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 DUXBA0A1W2PPF3 345 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 KBTBD11O94819 623 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
VHL-203ENST00000477538 RRNAD1Q96FB5 475 aaKnown RBP12.87□□□□□ -0.35
VHL-203ENST00000477538 RASL11BQ9BPW5 248 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 MMP24Q9Y5R2 645 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 ALG5Q9Y673 324 aa12.87□□□□□ -0.35
VHL-203ENST00000477538 JMJD1CQ15652 2540 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 C7orf66A4D0T2 115 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 AMY1AP04745 511 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 P0C879 139 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 VDAC1P21796 283 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 CADM3Q8N126 398 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 UXS1Q8NBZ7 420 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 OR4A5Q8NH83 315 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 TMEM167AQ8TBQ9 72 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
VHL-203ENST00000477538 CLCC1Q96S66 551 aa12.86□□□□□ -0.35
VHL-203ENST00000477538 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 SH2D7A6NKC9 451 aaPredicted RBP12.85□□□□□ -0.35
VHL-203ENST00000477538 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 UPK2O00526 184 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
VHL-203ENST00000477538 HOXB5P09067 269 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 PJVKQ0ZLH3 352 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 PRSS8Q16651 343 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 IZUMO4Q1ZYL8 232 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 NPFFR1Q9GZQ6 430 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 OR51J1Q9H342 316 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
VHL-203ENST00000477538 ZNF430Q9H8G1 570 aaPredicted RBP12.85□□□□□ -0.35
VHL-203ENST00000477538 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
VHL-203ENST00000477538 NF1P21359 2839 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 TRAV3A0A0B4J244 114 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 DBX1A6NMT0 343 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 FCN1O00602 326 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 ADAP1O75689 374 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 SNAPC5O75971 98 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 HLA-DRB1P01911 266 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 RPL15P61313 204 aaKnown RBP12.84□□□□□ -0.35
VHL-203ENST00000477538 MRGPRG-AS1Q2M3A8 158 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 NMSQ5H8A3 153 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 MMD2Q8IY49 270 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 TMED3Q9Y3Q3 217 aa12.84□□□□□ -0.35
VHL-203ENST00000477538 SSNA1O43805 119 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 CA2P00918 260 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 IFNA21P01568 189 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 CRYBA1P05813 215 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
VHL-203ENST00000477538 BLCAPP62952 87 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 SRSF2Q01130 221 aaKnown RBP12.83□□□□□ -0.36
VHL-203ENST00000477538 RELBQ01201 579 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 TNXAQ16473 311 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 C9orf152Q5JTZ5 239 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 GGNBP1Q5YKI7 109 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 OR4A16Q8NH70 328 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 HSPB9Q9BQS6 159 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 CACNG5Q9UF02 275 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 SETD2Q9BYW2 2564 aaPredicted RBP12.83□□□□□ -0.36
VHL-203ENST00000477538 CUBNO60494 3623 aa12.83□□□□□ -0.36
VHL-203ENST00000477538 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 C15orf61A6NNL5 157 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 CCSO14618 274 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
VHL-203ENST00000477538 ACTL6BO94805 426 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 FGF2P09038 288 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 SULT1A3P0DMM9 295 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 SULT1A4P0DMN0 295 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 MAS1LP35410 378 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 OR2B8PP59922 312 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 GNB1P62873 340 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 Q6ZRM9 215 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 PRSS22Q9GZN4 317 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 PRNDQ9UKY0 176 aa12.82□□□□□ -0.36
VHL-203ENST00000477538 HLA-GP17693 338 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 CX3CL1P78423 397 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
VHL-203ENST00000477538 SMCO1Q147U7 214 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 THOC7Q6I9Y2 204 aaKnown RBP12.81□□□□□ -0.36
VHL-203ENST00000477538 ZNF562Q6V9R5 426 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 Q6ZNX1 250 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 Q6ZS46 218 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
VHL-203ENST00000477538 A0A1B0GU03 582 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms