RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 RPP25LQ8N5L8 163 aaKnown RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF709Q8N972 641 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 CCL17Q92583 94 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 LHX4Q969G2 390 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 TUBA4BQ9H853 241 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 DYNLRB1Q9NP97 96 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 PPIAL4AQ9Y536 164 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 CHD6Q8TD26 2715 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 MBP02144 154 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 MDKP21741 143 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 HOXA1P49639 335 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 ERVFRD-1P60508 538 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 NCMAPQ5T1S8 102 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC25A48Q6ZT89 311 aaKnown RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR10G4Q8NGN3 311 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR10G9Q8NGN4 311 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR10G7Q8NGN6 311 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 RNASE6Q93091 150 aaKnown RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 RAB39BQ96DA2 213 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 RHOVQ96L33 236 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 GAL3ST2Q9H3Q3 398 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC25A22Q9H936 323 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM106BQ9NUM4 274 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNRD1Q9P1U0 126 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 TCF19Q9Y242 345 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 PKDREJQ9NTG1 2253 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 SMCO3A2RU48 225 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 C15orf61A6NNL5 157 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 C17orf112F2Z3M2 114 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 RRHO14718 337 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 IFNA1P01562 189 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 FOLR2P14207 255 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 TAGLN2P37802 199 aaKnown RBP9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 RAB11AP62491 216 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR4A47Q6IF82 309 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZFP82Q8N141 532 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 POLEQ07864 2286 aa9.04□□□□□ -0.96
HLA-DMB-260ENST00000477537 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 FCN3O75636 299 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 TSPAN9O75954 239 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 MT-ND4LP03901 98 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CT45A6P0DMU7 189 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CT45A5P0DMU8 189 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CT45A7P0DMV0 189 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CCL3L1P16619 93 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CD1BP29016 333 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 RAB13P51153 203 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CASP6P55212 293 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 DLK1P80370 383 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 LYPD2Q6UXB3 125 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 ABHD12Q8N2K0 398 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CA5BP1Q8WTZ4 195 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 H1FXQ92522 213 aaKnown RBP9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 NIPSNAP3BQ9BS92 247 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 ACTR3CQ9C0K3 210 aaPredicted RBP9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 VAX2Q9UIW0 290 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 KMT2BQ9UMN6 2715 aaPredicted RBP9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 FAM90A27PA6NNH2 459 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 NDUFB3O43676 98 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR2C1O95371 312 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 HRASP01112 189 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 CD3EP07766 207 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 FAM90A2PQ658T7 463 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM200BQ69YZ2 307 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC35E3Q7Z769 313 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 FAM24BQ8N5W8 94 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR10A7Q8NGE5 316 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 C2CD4CQ8TF44 421 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF714Q96N38 554 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMPRSS5Q9H3S3 457 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC35D1Q9NTN3 355 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 FOXA2Q9Y261 457 aaPredicted RBP9.03□□□□□ -0.96
HLA-DMB-260ENST00000477537 hCG_1809904A0A1W2PP81 198 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 A0A1W2PR64 198 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 A0A1W2PRV1 198 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 TNFRSF13BO14836 293 aaPredicted RBP9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 HSPE1P61604 102 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 HABP2Q14520 560 aaPredicted RBP9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 RTL8BQ17RB0 113 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 ACOT6Q3I5F7 207 aaPredicted RBP9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 RNF212Q495C1 297 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 LRRC10Q5BKY1 277 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 RBMS3Q6XE24 437 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR13D1Q8NGV5 346 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 RAB24Q969Q5 203 aa9.02□□□□□ -0.97
HLA-DMB-260ENST00000477537 P2RX4Q99571 388 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms