RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP188-205ENST00000477069 MBP02144 154 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 TMEM200BQ69YZ2 307 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 LYPD2Q6UXB3 125 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 HEPN1Q6WQI6 88 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 RAB39BQ96DA2 213 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
NUP188-205ENST00000477069 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 ZFP92A6NM28 416 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 RPL31P62899 125 aaKnown RBP9.4□□□□□ -0.9
NUP188-205ENST00000477069 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.9
NUP188-205ENST00000477069 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 P2RX4Q99571 388 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 KAAG1Q9UBP8 84 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 YLPM1P49750 1951 aaKnown RBP9.4□□□□□ -0.9
NUP188-205ENST00000477069 A0A1W2PPE2 198 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 VSTM5A8MXK1 200 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
NUP188-205ENST00000477069 CCL3L1P16619 93 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 CD1BP29016 333 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 HNF4GQ14541 408 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 RNF212Q495C1 297 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 FFAR4Q5NUL3 377 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 OR10G9Q8NGN4 311 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 OR10G7Q8NGN6 311 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 CCL17Q92583 94 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 MLXQ9UH92 298 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
NUP188-205ENST00000477069 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.39□□□□□ -0.91
NUP188-205ENST00000477069 A0A1W2PPH5 198 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
NUP188-205ENST00000477069 DLX6P56179 175 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 C1orf159Q96HA4 380 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
NUP188-205ENST00000477069 CEP295Q9C0D2 2601 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 PTPRQQ9UMZ3 2332 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 ICE1Q9Y2F5 2266 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 A0A087WWC5 75 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 RAB13P51153 203 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
NUP188-205ENST00000477069 ABHD12Q8N2K0 398 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 C8orf31Q8N9H6 132 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 MS4A5Q9H3V2 200 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 SLC25A22Q9H936 323 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 HEYLQ9NQ87 328 aaPredicted RBP9.39□□□□□ -0.91
NUP188-205ENST00000477069 SLC39A9Q9NUM3 307 aa9.39□□□□□ -0.91
NUP188-205ENST00000477069 SRRM4A7MD48 611 aaKnown RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 SEC14L6B5MCN3 397 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 SIAH2O43255 324 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 NDUFA2O43678 99 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 HRASP01112 189 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 IFNA10P01566 189 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 DLK1P80370 383 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 HABP2Q14520 560 aaPredicted RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 ST6GALNAC3Q8NDV1 305 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 LHX4Q969G2 390 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 B9A039 149 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 MPDU1O75352 247 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 NDUFS6O75380 124 aaKnown RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 PLAUP00749 431 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 CD3EP07766 207 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 CD81P60033 236 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 OR13D1Q8NGV5 346 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 TVP23CQ96ET8 276 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 DYNLRB1Q9NP97 96 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 ZNF257Q9Y2Q1 563 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 UPK2O00526 184 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 DVL1O14640 695 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 NDUFB3O43676 98 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 MYOD1P15172 320 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 GRNP28799 593 aaKnown RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 HOXA1P49639 335 aaPredicted RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 CEBPGP53567 150 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 KLRB1Q12918 225 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 MGST2Q99735 147 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 NIPSNAP3BQ9BS92 247 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 ACTR3CQ9C0K3 210 aaPredicted RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
NUP188-205ENST00000477069 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
NUP188-205ENST00000477069 A0A087X0M5 115 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 A0A1B0GX30 115 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 IFNA1P01562 189 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 RAB11AP62491 216 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 RTL8BQ17RB0 113 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 LRRC10Q5BKY1 277 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 FAM71F2Q6NXP2 309 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 LINC00311Q8N616 119 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 ZNF709Q8N972 641 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms