RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 IGKV1D-13A0A0B4J2D9 117 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 ACTL6BO94805 426 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 CRYGCP07315 174 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 ZNF735P0CB33 412 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 IGKV1-13P0DP09 117 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 RPA2P15927 270 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 RPS25P62851 125 aaKnown RBP9.29□□□□□ -0.92
TRAF4-209ENST00000473421 CBX3Q13185 183 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 RAB11BQ15907 218 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 KLK9Q2XQG4 91 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 TTC23Q5W5X9 447 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 MS4A15Q8N5U1 240 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 OR2C3Q8N628 320 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 DCUN1D5Q9BTE7 237 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 OR51E2Q9H255 320 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 SLC2A9Q9NRM0 540 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 KLK9Q9UKQ9 250 aa9.29□□□□□ -0.92
TRAF4-209ENST00000473421 RBM7Q9Y580 266 aaKnown RBP9.29□□□□□ -0.92
TRAF4-209ENST00000473421 IGLV11-55A0A075B6I3 123 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 MFNGO00587 321 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 DEFB4AO15263 64 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 DENRO43583 198 aaKnown RBP9.28□□□□□ -0.92
TRAF4-209ENST00000473421 ATF4P18848 351 aaPredicted RBP9.28□□□□□ -0.92
TRAF4-209ENST00000473421 PSMB6P28072 239 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
TRAF4-209ENST00000473421 APOC4P55056 127 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
TRAF4-209ENST00000473421 FAM209BQ5JX69 171 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 HES5Q5TA89 166 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 LIPKQ5VXJ0 399 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 APRG1Q8IVJ8 170 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
TRAF4-209ENST00000473421 DHRSXQ8N5I4 330 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 ZNF414Q96IQ9 312 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 PLCXD1Q9NUJ7 323 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
TRAF4-209ENST00000473421 TRAV25A0A0B4J276 109 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 KBTBD11O94819 623 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 CDK1P06493 297 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 NFYAP23511 347 aaPredicted RBP9.27□□□□□ -0.93
TRAF4-209ENST00000473421 GPR183P32249 361 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 SPHARQ15513 63 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 ANKRD55Q3KP44 614 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 RBPMS2Q6ZRY4 209 aaKnown RBP9.27□□□□□ -0.93
TRAF4-209ENST00000473421 SSX9Q7RTT3 188 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 OR56B1Q8NGI3 324 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 RAB3CQ96E17 227 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 GINS4Q9BRT9 223 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
TRAF4-209ENST00000473421 MUC4Q99102 2169 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 OR10A3P58181 314 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 TPBGQ13641 420 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 KCTD9Q7L273 389 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 SLC25A42Q86VD7 318 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 STPG3Q8N7X2 389 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 EEF1AKMT3Q96AZ1 226 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 OR2A7Q96R45 310 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 C5orf66Q9H5L9 145 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 MRPL27Q9P0M9 148 aaKnown RBP9.26□□□□□ -0.93
TRAF4-209ENST00000473421 FBXL17Q9UF56 701 aa9.26□□□□□ -0.93
TRAF4-209ENST00000473421 RBMX2Q9Y388 322 aaKnown RBP9.26□□□□□ -0.93
TRAF4-209ENST00000473421 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 DPPA5A6NC42 116 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 UBE2CO00762 179 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 ZNF207O43670 478 aaKnown RBP9.25□□□□□ -0.93
TRAF4-209ENST00000473421 FABP5Q01469 135 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 IRF3Q14653 427 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 MED22Q15528 200 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 OR4A47Q6IF82 309 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 C8orf59Q8N0T1 100 aaPredicted RBP9.25□□□□□ -0.93
TRAF4-209ENST00000473421 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 ZNF645Q8N7E2 425 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 OR10R2Q8NGX6 335 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 KIR2DL5BQ8NHK3 375 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
TRAF4-209ENST00000473421 MND1Q9BWT6 205 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 RAB22AQ9UL26 194 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 SPATA2Q9UM82 520 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
TRAF4-209ENST00000473421 IGHV3-21A0A0B4J1V1 117 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 IGLC7A0M8Q6 106 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 TSPAN4O14817 238 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 DIRAS3O95661 229 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 HIST1H1DP16402 221 aaKnown RBP9.24□□□□□ -0.93
TRAF4-209ENST00000473421 CRHBPP24387 322 aa9.24□□□□□ -0.93
TRAF4-209ENST00000473421 CALRP27797 417 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms