RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 HIPK2Q9H2X6 1198 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 IGHV4-61A0A0C4DH41 118 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 DFFBO76075 338 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 CFDP00746 253 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-206ENST00000472815 USF1P22415 310 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-206ENST00000472815 PAX9P55771 341 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 OR2B8PP59922 312 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 CLEC12BQ2HXU8 276 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 ALKAL2Q6UX46 152 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 MOB3BQ86TA1 216 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 OR1S2Q8NGQ3 325 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 RNF5Q99942 180 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 QTRT1Q9BXR0 403 aaKnown RBP11.84□□□□□ -0.51
HIF3A-206ENST00000472815 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 ENY2Q9NPA8 101 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 ZNF257Q9Y2Q1 563 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
HIF3A-206ENST00000472815 ARHGAP32A7KAX9 2087 aa11.84□□□□□ -0.51
HIF3A-206ENST00000472815 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 LY6LH3BQJ8 138 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 SAA1P0DJI8 122 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 NHLH2Q02577 135 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 SPANXN5Q5MJ07 72 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 LRRC20Q8TCA0 184 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 NRGNQ92686 78 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 TSNAXQ99598 290 aaKnown RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 TBL2Q9Y4P3 447 aaKnown RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 APCP25054 2843 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 FBN2P35556 2912 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 H3BP45 60 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 UPK2O00526 184 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 KBTBD11O94819 623 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM50AO95807 157 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 UBE2E1P51965 193 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 DLX1P56177 255 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 PUSL1Q8N0Z8 303 aaKnown RBP11.83□□□□□ -0.52
HIF3A-206ENST00000472815 OR5B3Q8NH48 314 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 SPG11Q96JI7 2443 aa11.83□□□□□ -0.52
HIF3A-206ENST00000472815 FAM157AC9JC47 383 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 CST7O76096 145 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-206ENST00000472815 KLRD1Q13241 179 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 RPL7L1Q6DKI1 246 aaKnown RBP11.82□□□□□ -0.52
HIF3A-206ENST00000472815 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 SLC25A32Q9H2D1 315 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 HEYLQ9NQ87 328 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-206ENST00000472815 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 ABCA12Q86UK0 2595 aa11.82□□□□□ -0.52
HIF3A-206ENST00000472815 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
HIF3A-206ENST00000472815 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-206ENST00000472815 CD1BP29016 333 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
HIF3A-206ENST00000472815 PRB3Q04118 309 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-206ENST00000472815 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 HCP5Q6MZN7 132 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 STPG2Q8N412 459 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 LILRB2Q8N423 598 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM217Q8N7C4 229 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM167AQ8TBQ9 72 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 ATP5SQ99766 215 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 COMMD5Q9GZQ3 224 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
HIF3A-206ENST00000472815 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
HIF3A-206ENST00000472815 B4DSR2 109 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 RNASEK-C17orf49H0YIS7 233 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 IFNA5P01569 189 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 METTL15P1P0C7V9 234 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 GATA3P23771 443 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 DYNLT3P51808 116 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-206ENST00000472815 CLINT1Q14677 625 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 TMEM14EPQ6UXP3 125 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
HIF3A-206ENST00000472815 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
HIF3A-206ENST00000472815 PLEKHA3Q9HB20 300 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 TRAV3A0A0B4J244 114 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 A0A1W2PPI3 338 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 MSMBP08118 114 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 F2RL1P55085 397 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 ATP5IP56385 69 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-206ENST00000472815 RAB11AP62491 216 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 PAX8Q06710 450 aa11.8□□□□□ -0.52
HIF3A-206ENST00000472815 ATP6V1FQ16864 119 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms