RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RIMS4Q9H426 269 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-203ENST00000468565 Q9N2K0 584 aa11.58□□□□□ -0.56
COL27A1-203ENST00000468565 SLC2A9Q9NRM0 540 aa11.58□□□□□ -0.56
COL27A1-203ENST00000468565 PSG11Q9UQ72 335 aa11.58□□□□□ -0.56
COL27A1-203ENST00000468565 TRAV39A0A0B4J263 110 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 C15orf65H3BRN8 121 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 NAPSAO96009 420 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 PPYP01298 95 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 KIR2DS1Q14954 304 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 KLHDC1Q8N7A1 406 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 AKR1E2Q96JD6 320 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 RAB9BQ9NP90 201 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 SERTAD4Q9NUC0 356 aa11.57□□□□□ -0.56
COL27A1-203ENST00000468565 MSGN1A6NI15 193 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 CTXN2P0C2S0 81 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 SRPXP78539 464 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 LTC4SQ16873 150 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 Q6ZPA2 131 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 CFHR4Q92496 578 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 ARL11Q969Q4 196 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 RPEQ96AT9 228 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-203ENST00000468565 TMEM30BQ3MIR4 351 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 SP6Q3SY56 376 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 Q3ZCU0 254 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 FOXRED2Q8IWF2 684 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 C8orf31Q8N9H6 132 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 SLC5A7Q9GZV3 580 aa11.56□□□□□ -0.56
COL27A1-203ENST00000468565 TRDCB7Z8K6 153 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 K7EPK0 472 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 DEDDO75618 318 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 GNG10P50151 68 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 RAB7AP51149 207 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 LOXL3P58215 753 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 IGSF11Q5DX21 431 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 EIF5AL1Q6IS14 154 aaKnown RBP11.55□□□□□ -0.56
COL27A1-203ENST00000468565 TRAT1Q6PIZ9 186 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 FAM71E2Q8N5Q1 922 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 RNF141Q8WVD5 230 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 RBM14Q96PK6 669 aaKnown RBP11.55□□□□□ -0.56
COL27A1-203ENST00000468565 PLEKHA2Q9HB19 425 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 GFOD1Q9NXC2 390 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 TRAPPC2LQ9UL33 140 aa11.55□□□□□ -0.56
COL27A1-203ENST00000468565 FAM90A9PA6NNJ1 464 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 FGF16O43320 207 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 SCO1O75880 301 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 CD24P25063 80 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 RPL12P30050 165 aaKnown RBP11.54□□□□□ -0.56
COL27A1-203ENST00000468565 BLCAPP62952 87 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-203ENST00000468565 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 WNT10AQ9GZT5 417 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 LSM5Q9Y4Y9 91 aaKnown RBP11.54□□□□□ -0.56
COL27A1-203ENST00000468565 TRBV6-6A0A0A6YYG2 114 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 A0A1W2PPI3 338 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 PCP4L1A6NKN8 68 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 C12orf77C9JDV5 145 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 MPPED1O15442 326 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 SCGB1D2O95969 90 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 RND3P61587 244 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 UQCC3Q6UW78 93 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 OR10X1Q8NGY0 326 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 WIPF2Q8TF74 440 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-203ENST00000468565 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 TMED3Q9Y3Q3 217 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 VWFP04275 2813 aa11.54□□□□□ -0.56
COL27A1-203ENST00000468565 C3orf85A0A1B0GTC6 90 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 NUDT19A8MXV4 375 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 E5RGE8 158 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 M0QZK8 103 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 SPINT2O43291 252 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 SCTP09683 121 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-203ENST00000468565 ZNF816Q0VGE8 651 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-203ENST00000468565 ARSJQ5FYB0 599 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-203ENST00000468565 Q6ZS46 218 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 TMED6Q8WW62 240 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 OR2S2Q9NQN1 319 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
COL27A1-203ENST00000468565 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
COL27A1-203ENST00000468565 RAB19A4D1S5 217 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 GPR31O00270 319 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 TSPAN15O95858 294 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 FBLN7Q53RD9 439 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 STPG2Q8N412 459 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 UBALD1Q8TB05 177 aa11.52□□□□□ -0.56
COL27A1-203ENST00000468565 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
COL27A1-203ENST00000468565 HSD17B6O14756 317 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms