RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ZNF257Q9Y2Q1 563 aa7.75□□□□□ -1.17
APOBEC1-202ENST00000467171 STRAPQ9Y3F4 350 aaKnown RBP7.75□□□□□ -1.17
APOBEC1-202ENST00000467171 AMMECR1Q9Y4X0 333 aaPredicted RBP7.75□□□□□ -1.17
APOBEC1-202ENST00000467171 KALRNO60229 2985 aa7.75□□□□□ -1.17
APOBEC1-202ENST00000467171 USF3Q68DE3 2245 aa7.75□□□□□ -1.17
APOBEC1-202ENST00000467171 KRTAP9-6A0A140TA67 174 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 PMS2P5A8MQ11 134 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 CEBPZOSA8MTT3 80 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ZNF705EA8MWA4 302 aaPredicted RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 H3BP45 60 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 TRIM77I1YAP6 450 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 UPK2O00526 184 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 FBXO24O75426 580 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 RBMXL2O75526 392 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 C1QL1O75973 258 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ARG1P05089 322 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 METTL15P1P0C7V9 234 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 PRTN3P24158 256 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ATP6V0CP27449 155 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 LGALS7P47929 136 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ATP5IP56385 69 aaPredicted RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ARL16Q0P5N6 197 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 TMEM267Q0VDI3 215 aaPredicted RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 SPANXN5Q5MJ07 72 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 IL34Q6ZMJ4 242 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 SSX9Q7RTT3 188 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 HAPLN4Q86UW8 402 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 TGIF2LXQ8IUE1 241 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 ZNF525Q8N782 197 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 TMEM217Q8N7C4 229 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 OR11H6Q8NGC7 330 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 OR4C13Q8NGP0 309 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 OR4A5Q8NH83 315 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 LYPD6BQ8NI32 183 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 VSTM2AQ8TAG5 236 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 MARC2Q969Z3 335 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 PINX1Q96BK5 328 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 FLYWCH2Q96CP2 140 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 CLCC1Q96S66 551 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 MRPL18Q9H0U6 180 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 HIPK2Q9H2X6 1198 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 UNKLQ9H9P5 680 aaKnown RBP7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 TCF19Q9Y242 345 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 WASHC3Q9Y3C0 194 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 RELNP78509 3460 aa7.74□□□□□ -1.17
APOBEC1-202ENST00000467171 MALRD1Q5VYJ5 2156 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 TRAV3A0A0B4J244 114 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 SRRM4A7MD48 611 aaKnown RBP7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 INS-IGF2F8WCM5 200 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 LY6LH3BQJ8 138 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 BUB1B-PAK6H3BSN5 160 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 NDUFS7O75251 213 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 GHRHP01286 108 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 IFNA17P01571 189 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 IGHV2-5P01817 119 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 PRB1P04280 392 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 IGKV1-16P04430 117 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 RNF224P0DH78 156 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 VWC2Q2TAL6 325 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 LRRC75BQ2VPJ9 315 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 BTNL8Q6UX41 500 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 DPPA3Q6W0C5 159 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 VKORC1L1Q8N0U8 176 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 Q8N7P7 452 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 HSD17B11Q8NBQ5 300 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 OR5B3Q8NH48 314 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 PSMG3Q9BT73 122 aaPredicted RBP7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 TMEM147Q9BVK8 224 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 GGACTQ9BVM4 153 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 MMP26Q9NRE1 261 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 NUP50Q9UKX7 468 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 KPTNQ9Y664 436 aa7.73□□□□□ -1.17
APOBEC1-202ENST00000467171 C15orf62A8K5M9 175 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 KRBOX1C9JBD0 128 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 TEX46H3BTG2 121 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 SHOXO15266 292 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 ENSAO43768 121 aaKnown RBP7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 KBTBD11O94819 623 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 SAA1P0DJI8 122 aaPredicted RBP7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 PDLIM4P50479 330 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 F2RL1P55085 397 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 OR2B8PP59922 312 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 PAX2Q02962 417 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 SLC38A11Q08AI6 406 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 TOR2AQ5JU69 321 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 PXDC1Q5TGL8 231 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 CENPVQ7Z7K6 275 aaPredicted RBP7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 COMMD1Q8N668 190 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 OR10P1Q8NGE3 313 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 OR4P4Q8NGL7 312 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 TMEM167AQ8TBQ9 72 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 SCGB1C1Q8TD33 95 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 RNF5Q99942 180 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 WDR61Q9GZS3 305 aaKnown RBP7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 TIMM9Q9Y5J7 89 aa7.72□□□□□ -1.17
APOBEC1-202ENST00000467171 ODF3BA8MYP8 253 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms