RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KLHDC1Q8N7A1 406 aa16.43■□□□□ 0.22
SDF4-205ENST00000465727 SAP25Q8TEE9 199 aa16.43■□□□□ 0.22
SDF4-205ENST00000465727 STARD4Q96DR4 205 aa16.43■□□□□ 0.22
SDF4-205ENST00000465727 V9GYV3 84 aa16.43■□□□□ 0.22
SDF4-205ENST00000465727 C20orf202A1L168 122 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 FAM166BA8MTA8 275 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 RRHO14718 337 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 OR5G3P0C626 314 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 IGLC2P0DOY2 106 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 IGLC3P0DOY3 106 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 MMDQ15546 238 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 OR52E5Q8NH55 327 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 PRSS46E5RG02 174 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 AMTP48728 403 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 CLDN18P56856 261 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 RHOBP62745 196 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 CX3CL1P78423 397 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 LAMTOR2Q9Y2Q5 125 aa16.42■□□□□ 0.22
SDF4-205ENST00000465727 PINLYPA6NC86 204 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 LINC00473A8K010 186 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 MT-CO3P00414 261 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 PLGLB1Q02325 96 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 MIC13Q5XKP0 118 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 NANOS1Q8WY41 292 aaKnown RBP16.41■□□□□ 0.22
SDF4-205ENST00000465727 TXN2Q99757 166 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 FAM103A1Q9BTL3 118 aaKnown RBP16.41■□□□□ 0.22
SDF4-205ENST00000465727 FOXJ2Q9P0K8 574 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 NAT8BQ9UHF3 227 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 ZNF891A8MT65 544 aaPredicted RBP16.41■□□□□ 0.22
SDF4-205ENST00000465727 PSPNO60542 156 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 HYPMO75409 117 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 HNRNPA3P51991 378 aaKnown RBP16.41■□□□□ 0.22
SDF4-205ENST00000465727 SRYQ05066 204 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 OR8I2Q8N0Y5 310 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 MS4A5Q9H3V2 200 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 HES4Q9HCC6 221 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 RNF114Q9Y508 228 aa16.41■□□□□ 0.22
SDF4-205ENST00000465727 TRA2AQ13595 282 aaKnown RBP eCLIP16.4■□□□□ 0.22
SDF4-205ENST00000465727 GABRA6Q16445 453 aa16.4■□□□□ 0.22
SDF4-205ENST00000465727 C19orf35Q6ZS72 473 aa16.4■□□□□ 0.22
SDF4-205ENST00000465727 SPEM1Q8N4L4 309 aa16.4■□□□□ 0.22
SDF4-205ENST00000465727 ST6GALNAC3Q8NDV1 305 aa16.4■□□□□ 0.22
SDF4-205ENST00000465727 LSM4Q9Y4Z0 139 aaKnown RBP16.4■□□□□ 0.22
SDF4-205ENST00000465727 ZNF324O75467 553 aaPredicted RBP16.39■□□□□ 0.21
SDF4-205ENST00000465727 OR9G9P0C7N8 305 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 PRRX1P54821 245 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 Q0VFX4 171 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 ZNF766Q5HY98 468 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 Q6ZN92 141 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 NPVFQ9HCQ7 196 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 A0A1W2PS18 150 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 VDAC2P45880 294 aaPredicted RBP16.39■□□□□ 0.21
SDF4-205ENST00000465727 EFNB3Q15768 340 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 TMEM136Q6ZRR5 245 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 STPG4Q8N801 248 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 IFI44Q8TCB0 444 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
SDF4-205ENST00000465727 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 HEYLQ9NQ87 328 aaPredicted RBP16.39■□□□□ 0.21
SDF4-205ENST00000465727 B4GALT7Q9UBV7 327 aa16.39■□□□□ 0.21
SDF4-205ENST00000465727 AQP7O14520 342 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 NDUFB8O95169 186 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 HLA-DQA1P01909 254 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 KLF3P57682 345 aaPredicted RBP16.38■□□□□ 0.21
SDF4-205ENST00000465727 PRAMEF5Q5TYX0 476 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 PRAMEF6Q5VXH4 476 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 PPP1R32Q7Z5V6 425 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 OR4A16Q8NH70 328 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 FAM216AQ8WUB2 273 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 OSTCQ9NRP0 149 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 GNG4P50150 75 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 TBC1D28Q2M2D7 210 aa16.38■□□□□ 0.21
SDF4-205ENST00000465727 MRPS16Q9Y3D3 137 aaKnown RBP16.38■□□□□ 0.21
SDF4-205ENST00000465727 DPRXA6NFQ7 191 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 GFRA3O60609 400 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 CCL4P13236 92 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 PI4KAP42356 2102 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 ZNF83P51522 516 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 LEMD1Q68G75 181 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
SDF4-205ENST00000465727 GCNT2Q8N0V5 402 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 PTPRBP23467 1997 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 CUL9Q8IWT3 2517 aa16.37■□□□□ 0.21
SDF4-205ENST00000465727 AMY1AP04745 511 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 PTTG1IPP53801 180 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 AESQ08117 197 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 RAB31Q13636 194 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 PMCHL1Q16048 86 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 OR5B3Q8NH48 314 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 PRR7Q8TB68 274 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 SLC25A10Q9UBX3 287 aaPredicted RBP16.36■□□□□ 0.21
SDF4-205ENST00000465727 CFAP54Q96N23 3096 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 TRGV8A0A0C4DH27 118 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 TOMM40O96008 361 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 FRMD6-AS1P0C7T7 363 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 PMCHP20382 165 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 OTX2P32243 289 aa16.36■□□□□ 0.21
SDF4-205ENST00000465727 GABRA2P47869 451 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms