RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TAS2R31P59538 309 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 RPL23AP62750 156 aaKnown RBP9.68□□□□□ -0.86
CHPF2-202ENST00000465601 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-202ENST00000465601 ZNF585BQ52M93 769 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 AKIRIN2Q53H80 203 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 C19orf54Q5BKX5 351 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 MMD2Q8IY49 270 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 OR51S1Q8NGJ8 323 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 OR13C8Q8NGS7 320 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 ZFAND1Q8TCF1 268 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 CASTOR1Q8WTX7 329 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 AIFM2Q9BRQ8 373 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 PLEKHA2Q9HB19 425 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 ZFP57Q9NU63 452 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 MCUBQ9NWR8 336 aa9.68□□□□□ -0.86
CHPF2-202ENST00000465601 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
CHPF2-202ENST00000465601 MSGN1A6NI15 193 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 SOX15O60248 233 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 KBTBD11O94819 623 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 APELAP0DMC3 54 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 PSMB8P28062 276 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 RND3P61587 244 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 CNPY1Q3B7I2 92 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 C10orf55Q5SWW7 151 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 TMEM65Q6PI78 240 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 TOMM5Q8N4H5 51 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 RNF152Q8N8N0 203 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 DMBX1Q8NFW5 382 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 OR5T1Q8NG75 326 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 OR4F17Q8NGA8 305 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 TMEM167AQ8TBQ9 72 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 SRSF12Q8WXF0 261 aaKnown RBP9.67□□□□□ -0.86
CHPF2-202ENST00000465601 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
CHPF2-202ENST00000465601 OR4F4Q96R69 305 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 PHB2Q99623 299 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 PRRT1Q99946 306 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 HRASLSQ9HDD0 168 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 COPZ2Q9P299 210 aa9.67□□□□□ -0.86
CHPF2-202ENST00000465601 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 NUDT19A8MXV4 375 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 CREBL2O60519 120 aaPredicted RBP9.66□□□□□ -0.86
CHPF2-202ENST00000465601 KRASP01116 189 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
CHPF2-202ENST00000465601 MYOD1P15172 320 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 RAB9AP51151 201 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 AP3S2P59780 193 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 ERVK-16P61578 105 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 KIAA0141Q14154 515 aaPredicted RBP9.66□□□□□ -0.86
CHPF2-202ENST00000465601 BAK1Q16611 211 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 POU2AF1Q16633 256 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 ASPHD1Q5U4P2 390 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 GDPD1Q8N9F7 314 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 MS4A10Q96PG2 267 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 SDHCQ99643 169 aaPredicted RBP9.66□□□□□ -0.86
CHPF2-202ENST00000465601 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
CHPF2-202ENST00000465601 TMEM140Q9NV12 185 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 BET1LQ9NYM9 111 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 COMMD9Q9P000 198 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 SCP2D1Q9UJQ7 156 aa9.66□□□□□ -0.86
CHPF2-202ENST00000465601 UPK2O00526 184 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 IL6RP08887 468 aaPredicted RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 FAUP35544 74 aaKnown RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 G6PCP35575 357 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 ECI1P42126 302 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 CDX1P47902 265 aaPredicted RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 RPL8P62917 257 aaKnown RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 ZNF57Q68EA5 555 aaPredicted RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 ZNF695Q8IW36 515 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 CCDC71LQ8N9Z2 235 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 OR5M8Q8NGP6 311 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 OR4A5Q8NH83 315 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 FYTTD1Q96QD9 318 aaKnown RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 TP53RKQ96S44 253 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 C5orf66Q9H5L9 145 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 ZNF355PQ9NSJ1 428 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 FAM212BQ9NTI7 297 aaPredicted RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 SLC2A8Q9NY64 477 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 GPR132Q9UNW8 380 aa9.65□□□□□ -0.86
CHPF2-202ENST00000465601 C14orf166Q9Y224 244 aaKnown RBP9.65□□□□□ -0.86
CHPF2-202ENST00000465601 C3orf85A0A1B0GTC6 90 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 MARCH11A6NNE9 402 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 E7EUB6 86 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 SERPINE2P07093 398 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 HLA-GP17693 338 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 CD40LGP29965 261 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 MAS1LP35410 378 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 RPL27AP46776 148 aaKnown RBP9.64□□□□□ -0.87
CHPF2-202ENST00000465601 INPP1P49441 399 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 ZNF45Q02386 682 aa9.64□□□□□ -0.87
CHPF2-202ENST00000465601 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
CHPF2-202ENST00000465601 SP6Q3SY56 376 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms