RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 FOXA2Q9Y261 457 aaPredicted RBP10.76□□□□□ -0.69
LIMD1-203ENST00000465039 VWFP04275 2813 aa10.76□□□□□ -0.69
LIMD1-203ENST00000465039 PKD1L1Q8TDX9 2849 aa10.76□□□□□ -0.69
LIMD1-203ENST00000465039 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 FCN1O00602 326 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 ATG12O94817 140 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 CNIH1O95406 144 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 IL6RP08887 468 aaPredicted RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 CD40LGP29965 261 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 PPP5CP53041 499 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 PIGPP57054 158 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 SRSF4Q08170 494 aaKnown RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 MRGPRG-AS1Q2M3A8 158 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 CNPY1Q3B7I2 92 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 PHLDA2Q53GA4 152 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 MRGPRFQ96AM1 343 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 TSC22D3Q99576 134 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 CITED2Q99967 270 aaPredicted RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 SLC25A21Q9BQT8 299 aaPredicted RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 C7orf50Q9BRJ6 194 aaKnown RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 CCDC32Q9BV29 185 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 SLA2Q9H6Q3 261 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF430Q9H8G1 570 aaPredicted RBP10.75□□□□□ -0.69
LIMD1-203ENST00000465039 COPZ2Q9P299 210 aa10.75□□□□□ -0.69
LIMD1-203ENST00000465039 TCRBV4S1A1TA0A5B7 111 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 ADARB2-AS1A8MUL3 147 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 SERPINE2P07093 398 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 CDX1P47902 265 aaPredicted RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 RPL23AP62750 156 aaKnown RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF585BQ52M93 769 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 OR4A47Q6IF82 309 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 HSD17B13Q7Z5P4 300 aaPredicted RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 R3HDM4Q96D70 268 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 RBMXL1Q96E39 390 aaKnown RBP10.74□□□□□ -0.69
LIMD1-203ENST00000465039 GPHA2Q96T91 129 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 MCUBQ9NWR8 336 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 FBXO7Q9Y3I1 522 aa10.74□□□□□ -0.69
LIMD1-203ENST00000465039 ARPC1BO15143 372 aaKnown RBP10.73□□□□□ -0.69
LIMD1-203ENST00000465039 S1PR2O95136 353 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 HLA-GP17693 338 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 INPP1P49441 399 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 PJVKQ0ZLH3 352 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 FAAP20Q6NZ36 180 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 SLC25A42Q86VD7 318 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 GRPEL2Q8TAA5 225 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 ABHD5Q8WTS1 349 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
LIMD1-203ENST00000465039 C3orf85A0A1B0GTC6 90 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 CENPXA8MT69 81 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 G3V318 75 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 UCP1P25874 307 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 LPAR6P43657 344 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 RUNX1Q01196 453 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 TNXAQ16473 311 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 ECSCRQ19T08 205 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 TMEM65Q6PI78 240 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 UNQ5815/PRO19632Q6UWF5 114 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 C11orf44Q8N8P7 122 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 LFNGQ8NES3 379 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 GALNT14Q96FL9 552 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 SDHCQ99643 169 aaPredicted RBP10.72□□□□□ -0.69
LIMD1-203ENST00000465039 RTBDNQ9BSG5 229 aaPredicted RBP10.72□□□□□ -0.69
LIMD1-203ENST00000465039 TMEM222Q9H0R3 208 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 C5orf66Q9H5L9 145 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 FKBP11Q9NYL4 201 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 WSB1Q9Y6I7 421 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 FBN3Q75N90 2809 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 TRRAPQ9Y4A5 3859 aa10.72□□□□□ -0.69
LIMD1-203ENST00000465039 CRYM-AS1A6NIL9 109 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 UPK2O00526 184 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 IL7P13232 177 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
LIMD1-203ENST00000465039 GNB1P62873 340 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 SRPXP78539 464 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 DHODHQ02127 395 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 RBMS2Q15434 407 aaKnown RBP10.71□□□□□ -0.69
LIMD1-203ENST00000465039 BAK1Q16611 211 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 FAM209BQ5JX69 171 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF57Q68EA5 555 aaPredicted RBP10.71□□□□□ -0.69
LIMD1-203ENST00000465039 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 ZNF695Q8IW36 515 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 FAM219AQ8IW50 185 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 VKORC1L1Q8N0U8 176 aa10.71□□□□□ -0.69
LIMD1-203ENST00000465039 OR5B3Q8NH48 314 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms