RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TMEM204Q9BSN7 226 aa11.6□□□□□ -0.55
ERCC3-205ENST00000460485 SLC35B3Q9H1N7 401 aa11.6□□□□□ -0.55
ERCC3-205ENST00000460485 PRNDQ9UKY0 176 aa11.6□□□□□ -0.55
ERCC3-205ENST00000460485 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-205ENST00000460485 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
ERCC3-205ENST00000460485 A0A087X0M5 115 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 A0A1B0GX30 115 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 FAM157AC9JC47 383 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 IFNA1P01562 189 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 ADCYAP1P18509 176 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 AGAP20933 346 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 RAB11AP62491 216 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 ZNF273Q14593 569 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 IZUMO4Q1ZYL8 232 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 ZNF672Q499Z4 452 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-205ENST00000460485 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-205ENST00000460485 MBD3L1Q8WWY6 194 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 PCGF1Q9BSM1 259 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 EIF5A2Q9GZV4 153 aaKnown RBP11.59□□□□□ -0.55
ERCC3-205ENST00000460485 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
ERCC3-205ENST00000460485 CISD1Q9NZ45 108 aaKnown RBP11.59□□□□□ -0.55
ERCC3-205ENST00000460485 FAM90A27PA6NNH2 459 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 PROP1O75360 226 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 SCO1O75880 301 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 IFNA17P01571 189 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 HSPB1P04792 205 aaKnown RBP11.58□□□□□ -0.56
ERCC3-205ENST00000460485 SELLP14151 372 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 PAX6P26367 422 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF134P52741 427 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF137PP52743 207 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 OR2B8PP59922 312 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 RELBQ01201 579 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 BTN1A1Q13410 526 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 KHDC3LQ587J8 217 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 RPL39P5Q59GN2 51 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 LYG1Q8N1E2 194 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 MUC15Q8N387 334 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 CA5BP1Q8WTZ4 195 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM186Q96B77 213 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 OR4C12Q96R67 309 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 DNHD1Q96M86 4753 aa11.58□□□□□ -0.56
ERCC3-205ENST00000460485 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
ERCC3-205ENST00000460485 H7C2Y5 167 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 NFYBP25208 207 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 RAB13P51153 203 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 KRTAP10-9P60411 292 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 DLK1P80370 383 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 HAPLN4Q86UW8 402 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 OR4A5Q8NH83 315 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 CCL17Q92583 94 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 NEIL1Q96FI4 390 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-205ENST00000460485 RHOVQ96L33 236 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 RAB1BQ9H0U4 201 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM14BQ9NUH8 114 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 BET1LQ9NYM9 111 aa11.57□□□□□ -0.56
ERCC3-205ENST00000460485 UBE2L5PA0A1B0GUS4 154 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 RBFOX3A6NFN3 312 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 PMS2P5A8MQ11 134 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SLC31A2O15432 143 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 CD99P14209 185 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 PPT1P50897 306 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
ERCC3-205ENST00000460485 ADORA2A-AS1P86434 159 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 RUNX1Q01196 453 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 AKR1C1Q04828 323 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 RHEBQ15382 184 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM155Q4W5P6 130 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 OR8G2PQ6IF36 304 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 PDPNQ86YL7 162 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 P2RX4Q99571 388 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SPOCK3Q9BQ16 436 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SCRT1Q9BWW7 348 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
ERCC3-205ENST00000460485 SLC35D1Q9NTN3 355 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 FAM96BQ9Y3D0 163 aa11.56□□□□□ -0.56
ERCC3-205ENST00000460485 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 hCG_1809904A0A1W2PP81 198 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 A0A1W2PPE2 198 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 A0A1W2PR64 198 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 A0A1W2PRV1 198 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 DNASE2O00115 360 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 AGPAT2O15120 278 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 MC5RP33032 325 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 VDAC2P45880 294 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 ARL16Q0P5N6 197 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM200BQ69YZ2 307 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 OR4A47Q6IF82 309 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms