RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 PRR31Q5SQ13 230 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 SSX9Q7RTT3 188 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 SLC35E3Q7Z769 313 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 PPP1R27Q86WC6 154 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 FOXRED2Q8IWF2 684 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 FAM71E2Q8N5Q1 922 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 OR4A5Q8NH83 315 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 ABHD5Q8WTS1 349 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 R3HDM4Q96D70 268 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
RFX3-207ENST00000449190 RRNAD1Q96FB5 475 aaKnown RBP7.28□□□□□ -1.24
RFX3-207ENST00000449190 RHOVQ96L33 236 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 TP53RKQ96S44 253 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 PALMDQ9NP74 551 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 TBC1D24Q9ULP9 559 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 SIGLEC9Q9Y336 463 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 NUBP2Q9Y5Y2 271 aa7.28□□□□□ -1.24
RFX3-207ENST00000449190 SH2D7A6NKC9 451 aaPredicted RBP7.27□□□□□ -1.25
RFX3-207ENST00000449190 SRRM4A7MD48 611 aaKnown RBP7.27□□□□□ -1.25
RFX3-207ENST00000449190 IGLV2-23P01705 113 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 HLA-DRB1P01911 266 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 OR5AC1P0C628 307 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 SAA1P0DJI8 122 aaPredicted RBP7.27□□□□□ -1.25
RFX3-207ENST00000449190 UCP1P25874 307 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 BTCP35070 178 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 BRWD1-AS2P59051 145 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 KRTAP10-3P60369 221 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 IFITM3Q01628 133 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 DCTN2Q13561 401 aaKnown RBP7.27□□□□□ -1.25
RFX3-207ENST00000449190 ZNF585BQ52M93 769 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 PLET1Q6UQ28 207 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 ZNF562Q6V9R5 426 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 H2BFWTQ7Z2G1 175 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 CENPVQ7Z7K6 275 aaPredicted RBP7.27□□□□□ -1.25
RFX3-207ENST00000449190 MMD2Q8IY49 270 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 VKORC1L1Q8N0U8 176 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 LGI3Q8N145 548 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 Q8N2B8 174 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 OR4A16Q8NH70 328 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 GON7Q9BXV9 100 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 TMEM222Q9H0R3 208 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 C20orf85Q9H1P6 137 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 ZNF702PQ9H963 129 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 FKBP11Q9NYL4 201 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 FLVCR2Q9UPI3 526 aa7.27□□□□□ -1.25
RFX3-207ENST00000449190 TRAV6A0A075B6T7 132 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 MARCH11A6NNE9 402 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 AP4M1O00189 453 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 FCN1O00602 326 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 RBMXL2O75526 392 aaKnown RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 KBTBD11O94819 623 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 SFT2D2O95562 160 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 CA2P00918 260 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 IGHG2P01859 326 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 AMY1AP04745 511 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 CRYGBP07316 175 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 OR4E1P0C645 316 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 VSIG10L2P0DP72 767 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 ANXA7P20073 488 aaKnown RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 MAS1LP35410 378 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 G6PCP35575 357 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 AKR1C2P52895 323 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 SLC35B1P78383 322 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 CX3CL1P78423 397 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 SRSF4Q08170 494 aaKnown RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 TMEM267Q0VDI3 215 aaPredicted RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 FXYD3Q14802 87 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 TNXAQ16473 311 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 POU2AF1Q16633 256 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 PRSS8Q16651 343 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 TMEM268Q5VZI3 342 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 OR4A47Q6IF82 309 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 PUSL1Q8N0Z8 303 aaKnown RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 CADM3Q8N126 398 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 DUSP18Q8NEJ0 188 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 COQ8AQ8NI60 647 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 TMEM167AQ8TBQ9 72 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 CASTOR1Q8WTX7 329 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 IL22RA2Q969J5 263 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 TMEM230Q96A57 120 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 GALNT14Q96FL9 552 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 PHB2Q99623 299 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 ALX4Q9H161 411 aaPredicted RBP7.26□□□□□ -1.25
RFX3-207ENST00000449190 OR51J1Q9H342 316 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 PARP11Q9NR21 331 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 TMEM140Q9NV12 185 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 NUDT15Q9NV35 164 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 BET1LQ9NYM9 111 aa7.26□□□□□ -1.25
RFX3-207ENST00000449190 C9orf170A2RU37 121 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 UPK2O00526 184 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 CDS2O95674 445 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 DHFRP00374 187 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 HLA-AP01891 365 aaKnown RBP7.25□□□□□ -1.25
RFX3-207ENST00000449190 HLA-GP17693 338 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 VDAC1P21796 283 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 RPL8P62917 257 aaKnown RBP7.25□□□□□ -1.25
RFX3-207ENST00000449190 PPP1R1AQ13522 171 aa7.25□□□□□ -1.25
RFX3-207ENST00000449190 TMEM187Q14656 261 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms