RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 RSG1Q9BU20 258 aa14.4□□□□□ -0.1
LMNA-208ENST00000448611 TMEM231Q9H6L2 316 aa14.4□□□□□ -0.1
LMNA-208ENST00000448611 UBTD1Q9HAC8 227 aa14.4□□□□□ -0.1
LMNA-208ENST00000448611 COL12A1Q99715 3063 aa14.4□□□□□ -0.1
LMNA-208ENST00000448611 A6NNC1 897 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 CDKN1AP38936 164 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 COMMD1Q8N668 190 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 OSR1Q8TAX0 266 aaPredicted RBP14.39□□□□□ -0.11
LMNA-208ENST00000448611 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 FBXO7Q9Y3I1 522 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 IGHV2-26A0A0B4J1V2 119 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 UBE2L5PA0A1B0GUS4 154 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 UPK2O00526 184 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 RNF224P0DH78 156 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 SNCAP37840 140 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 HSPE1P61604 102 aaKnown RBP14.39□□□□□ -0.11
LMNA-208ENST00000448611 RPS16P62249 146 aaKnown RBP14.39□□□□□ -0.11
LMNA-208ENST00000448611 VWC2Q2TAL6 325 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 TMEM177Q53S58 311 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 AKR1C8PQ5T2L2 129 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 PUSL1Q8N0Z8 303 aaKnown RBP14.39□□□□□ -0.11
LMNA-208ENST00000448611 TAF15Q92804 592 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMNA-208ENST00000448611 TNFRSF14Q92956 283 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 TMEM147Q9BVK8 224 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 HIPK2Q9H2X6 1198 aa14.39□□□□□ -0.11
LMNA-208ENST00000448611 MALRD1Q5VYJ5 2156 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 C22orf46C9J442 243 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 IGLV1-47P01700 117 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 CD5P06127 495 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 ADCYAP1P18509 176 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 DLX1P56177 255 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 SRSF1Q07955 248 aaKnown RBP eCLIP14.38□□□□□ -0.11
LMNA-208ENST00000448611 DPPA3Q6W0C5 159 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 CLCC1Q96S66 551 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 AIFM2Q9BRQ8 373 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 PATZ1Q9HBE1 687 aaKnown RBP14.38□□□□□ -0.11
LMNA-208ENST00000448611 TREM1Q9NP99 234 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 HEYLQ9NQ87 328 aaPredicted RBP14.38□□□□□ -0.11
LMNA-208ENST00000448611 UQCC1Q9NVA1 299 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 BET1LQ9NYM9 111 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 PRNDQ9UKY0 176 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 DOCK11Q5JSL3 2073 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 DCHS2Q6V1P9 2916 aa14.38□□□□□ -0.11
LMNA-208ENST00000448611 RNASEK-C17orf49H0YIS7 233 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 H7C2Y5 167 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 SCAF4O95104 1147 aaKnown RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 F12P00748 615 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 APOC3P02656 99 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 SAA1P0DJI8 122 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 IL3RAP26951 378 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 RPP30P78346 268 aaKnown RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 SP5Q6BEB4 398 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 PDPNQ86YL7 162 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 PCGF1Q9BSM1 259 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 SCRT1Q9BWW7 348 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 TET2Q6N021 2002 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 HOXA1P49639 335 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 DVL1P1P54792 670 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 HLA-DRB5Q30154 266 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 TGIF2LXQ8IUE1 241 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 LHX4Q969G2 390 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 FLYWCH2Q96CP2 140 aaKnown RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 HARBI1Q96MB7 349 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 MS4A7Q9GZW8 240 aaPredicted RBP14.37□□□□□ -0.11
LMNA-208ENST00000448611 ZNF257Q9Y2Q1 563 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 OR51B2Q9Y5P1 312 aa14.37□□□□□ -0.11
LMNA-208ENST00000448611 RRHO14718 337 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 NDUFS7O75251 213 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 IFNA10P01566 189 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 LIPFP07098 398 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 MYOD1P15172 320 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 PRRX1P54821 245 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 SERF2P84101 59 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 SPSB3Q6PJ21 355 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 CENPVQ7Z7K6 275 aaPredicted RBP14.36□□□□□ -0.11
LMNA-208ENST00000448611 OR4C13Q8NGP0 309 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 TMEM170AQ8WVE7 144 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 CLEC7AQ9BXN2 247 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 TIMM9Q9Y5J7 89 aa14.36□□□□□ -0.11
LMNA-208ENST00000448611 FAM157AC9JC47 383 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 C9JQL5 133 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 KBTBD11O94819 623 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 H2AFB1P0C5Y9 115 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 MDKP21741 143 aaPredicted RBP14.35□□□□□ -0.11
LMNA-208ENST00000448611 C10orf91Q5T1B1 145 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 BEND2Q8NDZ0 799 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 LFNGQ8NES3 379 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 WASHC3Q9Y3C0 194 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 PRSS46E5RG02 174 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 PRB3Q04118 309 aaPredicted RBP14.35□□□□□ -0.11
LMNA-208ENST00000448611 SSBP3Q9BWW4 388 aaPredicted RBP14.35□□□□□ -0.11
LMNA-208ENST00000448611 VSIRQ9H7M9 311 aa14.35□□□□□ -0.11
LMNA-208ENST00000448611 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
LMNA-208ENST00000448611 hCG_1809904A0A1W2PP81 198 aa14.34□□□□□ -0.11
LMNA-208ENST00000448611 A0A1W2PPE2 198 aa14.34□□□□□ -0.11
LMNA-208ENST00000448611 A0A1W2PR64 198 aa14.34□□□□□ -0.11
LMNA-208ENST00000448611 A0A1W2PRV1 198 aa14.34□□□□□ -0.11
LMNA-208ENST00000448611 MC5RP33032 325 aa14.34□□□□□ -0.11
LMNA-208ENST00000448611 GPR6P46095 362 aaPredicted RBP14.34□□□□□ -0.11
LMNA-208ENST00000448611 EFNA4P52798 201 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms