RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 TMEM167AQ8TBQ9 72 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 FYTTD1Q96QD9 318 aaKnown RBP13.54□□□□□ -0.24
DDX56-207ENST00000448192 DPPA5A6NC42 116 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 SULT1C2O00338 296 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 RPL27AP46776 148 aaKnown RBP13.53□□□□□ -0.24
DDX56-207ENST00000448192 EXOSC2Q13868 293 aaKnown RBP13.53□□□□□ -0.24
DDX56-207ENST00000448192 MSMO1Q15800 293 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 SLC25A42Q86VD7 318 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 TMEM17Q86X19 198 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 ZBTB34Q8NCN2 500 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
DDX56-207ENST00000448192 TRBV9A0A0B4J1U6 114 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 TEX22C9J3V5 150 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 OR2J3O76001 311 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 MAS1LP35410 378 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 HERV-K104P61576 105 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 NECAP1Q8NC96 275 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 EHFQ9NZC4 300 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
DDX56-207ENST00000448192 E7EUB6 86 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 IL6RP08887 468 aaPredicted RBP13.51□□□□□ -0.25
DDX56-207ENST00000448192 FRMD6-AS1P0C7T7 363 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 TAS2R20P59543 309 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
DDX56-207ENST00000448192 CATR1Q13166 79 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 OR4A47Q6IF82 309 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 IL34Q6ZMJ4 242 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 ZNF818PQ6ZRF7 136 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 AIFM2Q9BRQ8 373 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 HRASLSQ9HDD0 168 aa13.51□□□□□ -0.25
DDX56-207ENST00000448192 KMT2CQ8NEZ4 4911 aaKnown RBP13.5□□□□□ -0.25
DDX56-207ENST00000448192 BMPR1BO00238 502 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 MYOD1P15172 320 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 RFX2P48378 723 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 NCS1P62166 190 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 C15orf32Q32M92 178 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 OR51H1Q8NH63 302 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 SLC25A46Q96AG3 418 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
DDX56-207ENST00000448192 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.49□□□□□ -0.25
DDX56-207ENST00000448192 A0A1B0GW64 132 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 RBFOX2O43251 390 aaKnown RBP eCLIP13.49□□□□□ -0.257e-8■□□□□ 9
DDX56-207ENST00000448192 PMP2P02689 132 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 CSN3P07498 182 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 AREGP15514 252 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 HLA-GP17693 338 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 PRSS3P35030 304 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 AADACL3Q5VUY0 350 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 OR5H2Q8NGV7 314 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 ZNF2Q9BSG1 426 aaPredicted RBP13.49□□□□□ -0.25
DDX56-207ENST00000448192 FUNDC2Q9BWH2 189 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 COMMD3Q9UBI1 195 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 PEMTQ9UBM1 199 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
DDX56-207ENST00000448192 H0Y980 276 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 HPRT1P00492 218 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 EIF4EP06730 217 aaKnown RBP13.48□□□□□ -0.25
DDX56-207ENST00000448192 TAS2R31P59538 309 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 VBP1P61758 197 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 Q8N1Y9 231 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
DDX56-207ENST00000448192 KCTD12Q96CX2 325 aaKnown RBP13.48□□□□□ -0.25
DDX56-207ENST00000448192 SMIM31A0A1B0GVY4 71 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 DHFRP00374 187 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 REG1AP05451 166 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 RPA2P15927 270 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 NQO2P16083 231 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 PSMB6P28072 239 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 GNRHRP30968 328 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 TAS2R46P59540 309 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 DHRS11Q6UWP2 260 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 DMBX1Q8NFW5 382 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 S4R3C0 116 aa13.47□□□□□ -0.25
DDX56-207ENST00000448192 NBEAL2Q6ZNJ1 2754 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 TRAV3A0A0B4J244 114 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 UPK2O00526 184 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 S1PR2O95136 353 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 NDUFB8O95169 186 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 IGHV3-23P01764 117 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
DDX56-207ENST00000448192 RLN1P04808 185 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 CRYGCP07315 174 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 IGHV4-30-4P0DP06 118 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 DEFA4P12838 97 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 NAT1P18440 290 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms