RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 GZMMP51124 257 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 BSPH1Q075Z2 132 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 FOXF1Q12946 379 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 TMED1Q13445 227 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 ZNHIT3Q15649 155 aaPredicted RBP1.52□□□□□ -2.17
VPS41-207ENST00000439468 CST6Q15828 149 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 USF2Q15853 346 aaPredicted RBP1.52□□□□□ -2.17
VPS41-207ENST00000439468 TMEM249Q2WGJ8 235 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 EBLN2Q6P2I7 272 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 DOLPP1Q86YN1 238 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 ACBD4Q8NC06 268 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 MFSD8Q8NHS3 518 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 MED10Q9BTT4 135 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 ASCL3Q9NQ33 180 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 ZNF407Q9C0G0 2248 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 MXRA5Q9NR99 2828 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 NAV1Q8NEY1 1877 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 KIAA1549LQ6ZVL6 1849 aa1.52□□□□□ -2.17
VPS41-207ENST00000439468 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
VPS41-207ENST00000439468 TACC2O95359 2948 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 VWFP04275 2813 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 DOCK6Q96HP0 2047 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 PTPRDP23468 1912 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 SPAARA0A1B0GVQ0 90 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 B4DEV8 164 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 C5orf67F2Z3F1 127 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 M0QX08 132 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 SLC31A1O15431 190 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 SLC25A20O43772 301 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 RAB36O95755 333 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 PSMA1P25786 263 aaKnown RBP1.51□□□□□ -2.17
VPS41-207ENST00000439468 CRABP1P29762 137 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 GABARAPL2P60520 117 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 PSG4Q00888 419 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 PDGFRLQ15198 375 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 PYCR3Q53H96 274 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 RBM48Q5RL73 367 aaKnown RBP1.51□□□□□ -2.17
VPS41-207ENST00000439468 SPNS3Q6ZMD2 512 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 Q6ZRU5 148 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 TMPPEQ6ZT21 453 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 VN1R4Q7Z5H5 301 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 BLIDQ8IZY5 108 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 DEFB124Q8NES8 71 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 HBEGFQ99075 208 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 CHST5Q9GZS9 411 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 OR52A5Q9H2C5 316 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 SPACA1Q9HBV2 294 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 TAS2R9Q9NYW1 312 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 ZNF106Q9H2Y7 1883 aaKnown RBP1.51□□□□□ -2.17
VPS41-207ENST00000439468 PI4KAP42356 2102 aa1.51□□□□□ -2.17
VPS41-207ENST00000439468 DLG5Q8TDM6 1919 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 CEP192Q8TEP8 1941 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 MYH2Q9UKX2 1941 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 IGSF23A1L1A6 192 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 VPS37CA5D8V6 355 aaPredicted RBP1.5□□□□□ -2.17
VPS41-207ENST00000439468 C9J4A7 227 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 ZNF878C9JN71 531 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 CRYGDP07320 174 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 ORM2P19652 201 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 GADD45AP24522 165 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 GRPRP30550 384 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 SPAM1P38567 509 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 RAB8AP61006 207 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 OR8G1Q15617 311 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 FAM229BQ4G0N7 80 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 CENPWQ5EE01 88 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 HENMT1Q5T8I9 393 aaKnown RBP1.5□□□□□ -2.17
VPS41-207ENST00000439468 ZNF567Q8N184 647 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 TMEM75Q8N9X5 138 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 OR4P4Q8NGL7 312 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 OR2V1Q8NHB1 315 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 ANGPTL6Q8NI99 470 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 CCDC12Q8WUD4 166 aaPredicted RBP1.5□□□□□ -2.17
VPS41-207ENST00000439468 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 COMMD9Q9P000 198 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 TENM1Q9UKZ4 2725 aa1.5□□□□□ -2.17
VPS41-207ENST00000439468 RYR1P21817 5038 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 CLUHO75153 1309 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 IGHV3OR15-7A0A075B7D8 119 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 C17orf98A8MV24 154 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 G3V3Q6 166 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 TOR1AO14656 332 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 NEMFO60524 1076 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 PVALBP20472 110 aaPredicted RBP1.49□□□□□ -2.17
VPS41-207ENST00000439468 DLX6P56179 175 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 PAFAH1B3Q15102 231 aaKnown RBP1.49□□□□□ -2.17
VPS41-207ENST00000439468 ZNF181Q2M3W8 571 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 TRMT12Q53H54 448 aaKnown RBP1.49□□□□□ -2.17
VPS41-207ENST00000439468 TTC33Q6PID6 262 aaPredicted RBP1.49□□□□□ -2.17
VPS41-207ENST00000439468 NIT1Q86X76 327 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 CRLF3Q8IUI8 442 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 ATP6V1C2Q8NEY4 427 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 CD200R1Q8TD46 325 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 DTD1Q8TEA8 209 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 TAMM41Q96BW9 452 aa1.49□□□□□ -2.17
VPS41-207ENST00000439468 EBNA1BP2Q99848 306 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms