RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 OR10AG1Q8NH19 301 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TRGV9Q99603 122 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 UBE2CO00762 179 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF737O75373 536 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 UBE2L3P68036 154 aaKnown RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 PIP4P1Q86T03 277 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 KLF14Q8TD94 323 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RPUSD1Q9UJJ7 312 aaKnown RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ERRFI1Q9UJM3 462 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM89A2RUT3 159 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 C5orf52A6NGY3 159 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TGFBR3LH3BV60 316 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 SOCS1O15524 211 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 GHRHP01286 108 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 IGLV1-44P01699 117 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 IFITM2Q01629 132 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 VWA1Q6PCB0 445 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF474Q6S9Z5 364 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 SEPSECSQ9HD40 501 aaKnown RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TRBV6-1A0A0K0K1D8 114 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 MYOD1P15172 320 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 NBL1P41271 181 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 LPAR6P43657 344 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 Q6ZS92 163 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 WFIKKN1Q96NZ8 548 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM238LA0A1B0GVL6 79 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 A6NJY4 79 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 LINC01565O15544 149 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CCL2P13500 99 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RELQ04864 619 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CD300CQ08708 224 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM177Q53S58 311 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 KRBOX4Q5JUW0 171 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 SFTA2Q6UW10 78 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CYB561D1Q8N8Q1 229 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 RSG1Q9BU20 258 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 LIPGQ9Y5X9 500 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 USF2Q15853 346 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 C16orf54Q6UWD8 224 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 DMRTC2Q8IXT2 367 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 SELENOHQ8IZQ5 122 aaKnown RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZIC4Q8N9L1 334 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 OR2T6Q8NHC8 308 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM191AQ9H0A3 160 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 DLL3Q9NYJ7 618 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 WDR83OSQ9Y284 106 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 LNP1A1A4G5 178 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF90Q03938 601 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 DMWDQ09019 674 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 CR1LQ2VPA4 569 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 OR2T2Q6IF00 324 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 DTX1Q86Y01 620 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 PAQR4Q8N4S7 273 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-205ENST00000433355 VN1R17PQ8TDU5 208 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 AP1S3Q96PC3 154 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 HSPB8Q9UJY1 196 aa3.18□□□□□ -1.9
SHPRH-205ENST00000433355 A0A1W2PNR3 127 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 FAM24AA6NFZ4 105 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 H7C1H1 209 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 UPK2O00526 184 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 HYPMO75409 117 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ATP6V0CP27449 155 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SUPT4H1P63272 117 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF324BQ6AW86 544 aaPredicted RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TCF19Q9Y242 345 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PROB1E7EW31 1015 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SIAH2O43255 324 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 OR2H2O95918 312 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RNASE12Q5GAN4 147 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM116Q8NCL8 245 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 CLDND2Q8NHS1 167 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 IGKV1-9A0A0C4DH69 117 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SHISA3A0PJX4 238 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 COX7A2P2O60397 106 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PHYHD1Q5SRE7 291 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF705AQ6ZN79 300 aaPredicted RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 OR10AC1Q8NH08 325 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RASL11BQ9BPW5 248 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 BEX1Q9HBH7 125 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 A0A087X0M5 115 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 A0A1B0GX30 115 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 FOXH1O75593 365 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PAX1P15863 534 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 TCF24Q7RTU0 167 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SLC16A13Q7RTY0 426 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 CLUHP3Q96NS8 147 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SNCGO76070 127 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 C8orf88P0DMB2 117 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RPS2P15880 293 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SPNP16150 400 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PRDX2P32119 198 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 C10orf113Q5VZT2 155 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RND1Q92730 232 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 RPEQ96AT9 228 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 SPOCK3Q9BQ16 436 aa3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PEF1Q9UBV8 284 aaKnown RBP3.17□□□□□ -1.9
SHPRH-205ENST00000433355 PGLYRP1O75594 196 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms