RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RRHO14718 337 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 HMGB3O15347 200 aaKnown RBP13.3□□□□□ -0.28
MBD4-203ENST00000429544 LY86O95711 162 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 PDLIM3Q53GG5 364 aaPredicted RBP13.3□□□□□ -0.28
MBD4-203ENST00000429544 TMEM200BQ69YZ2 307 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 LHX4Q969G2 390 aa13.3□□□□□ -0.28
MBD4-203ENST00000429544 A0A1W2PPE2 198 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 A0A1W2PPH5 198 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 SMCO3A2RU48 225 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 CT45A6P0DMU7 189 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 CT45A5P0DMU8 189 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 CT45A7P0DMV0 189 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
MBD4-203ENST00000429544 ABHD12Q8N2K0 398 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 NDUFB3O43676 98 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
MBD4-203ENST00000429544 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
MBD4-203ENST00000429544 RAB11AP62491 216 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 CTSZQ9UBR2 303 aa13.29□□□□□ -0.28
MBD4-203ENST00000429544 CCL21O00585 134 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 TNFRSF13BO14836 293 aaPredicted RBP13.28□□□□□ -0.28
MBD4-203ENST00000429544 HRASP01112 189 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 MYOD1P15172 320 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 PAX6P26367 422 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 CD1BP29016 333 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 LRRC10Q5BKY1 277 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 OR10A7Q8NGE5 316 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 MS4A5Q9H3V2 200 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 FOXA2Q9Y261 457 aaPredicted RBP13.28□□□□□ -0.28
MBD4-203ENST00000429544 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 CTXND1A0A1B0GTU2 59 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 C17orf112F2Z3M2 114 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 MBP02144 154 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 CTRB1P17538 263 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 KLRB1Q12918 225 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 CTRB2Q6GPI1 263 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 HEPN1Q6WQI6 88 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 OR13D1Q8NGV5 346 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 TMEM14BQ9NUH8 114 aa13.28□□□□□ -0.28
MBD4-203ENST00000429544 SPTA1P02549 2419 aa13.27□□□□□ -0.28
MBD4-203ENST00000429544 IFNA1P01562 189 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 IGKV1-16P04430 117 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 RTL8BQ17RB0 113 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 NIPSNAP3BQ9BS92 247 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 MRPL20Q9BYC9 149 aaKnown RBP13.27□□□□□ -0.29
MBD4-203ENST00000429544 IGHV1-69-2A0A0G2JMI3 117 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 DVL1O14640 695 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 EFNB3Q15768 340 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 POU2AF1Q16633 256 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 ZFP82Q8N141 532 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 HINT2Q9BX68 163 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 ACTR3CQ9C0K3 210 aaPredicted RBP13.27□□□□□ -0.29
MBD4-203ENST00000429544 TMPRSS5Q9H3S3 457 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 VAX2Q9UIW0 290 aa13.27□□□□□ -0.29
MBD4-203ENST00000429544 B9A039 149 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 IFNA4P05014 189 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 DEFA4P12838 97 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 CHRNB4P30926 498 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 HSPE1P61604 102 aaKnown RBP13.26□□□□□ -0.29
MBD4-203ENST00000429544 DLK1P80370 383 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 ZNF833PQ6ZTB9 187 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 Q8N7P7 452 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 ENY2Q9NPA8 101 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 OR51B2Q9Y5P1 312 aa13.26□□□□□ -0.29
MBD4-203ENST00000429544 LOXP28300 417 aaPredicted RBP13.25□□□□□ -0.29
MBD4-203ENST00000429544 TAGLN2P37802 199 aaKnown RBP13.25□□□□□ -0.29
MBD4-203ENST00000429544 ST6GALNAC3Q8NDV1 305 aa13.25□□□□□ -0.29
MBD4-203ENST00000429544 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
MBD4-203ENST00000429544 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
MBD4-203ENST00000429544 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
MBD4-203ENST00000429544 SIAH2O43255 324 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 OR2C1O95371 312 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 MT-ND4LP03901 98 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 FOLR2P14207 255 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 NPY1RP25929 384 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 REG1BP48304 166 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 ACOT6Q3I5F7 207 aaPredicted RBP13.24□□□□□ -0.29
MBD4-203ENST00000429544 FBXL19-AS1Q494R0 122 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 FAM24BQ8N5W8 94 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 C2CD4CQ8TF44 421 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 PRNDQ9UKY0 176 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 hCG_1809904A0A1W2PP81 198 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 A0A1W2PR64 198 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 A0A1W2PRV1 198 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 ZNF727A8MUV8 499 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 UPK2O00526 184 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms