RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 OR5T1Q8NG75 326 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 RAB24Q969Q5 203 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 WFIKKN1Q96NZ8 548 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 SMDT1Q9H4I9 107 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 METTL1Q9UBP6 276 aaKnown RBP9.52□□□□□ -0.89
UBR4-207ENST00000425413 SPTBN1Q01082 2364 aaKnown RBP9.52□□□□□ -0.89
UBR4-207ENST00000425413 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 FABP1P07148 127 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CGB3P0DN86 165 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CGB7P0DN87 165 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 GATA4P43694 442 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 RELBQ01201 579 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CA5BP1Q8WTZ4 195 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 SAP30LQ9HAJ7 183 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 TRAV1-1A0A0B4J248 108 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 TRGV8A0A0C4DH27 118 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 IGKV1-16P04430 117 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 UBE2G2P60604 165 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 SSMEM1Q8WWF3 244 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 TCF19Q9Y242 345 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 IGHV2-5P01817 119 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CD1BP29016 333 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 PAX5Q02548 391 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 ELOBQ15370 118 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CLEC12BQ2HXU8 276 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 C4orf17Q53FE4 359 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 OR4A47Q6IF82 309 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 OR4S2Q8NH73 311 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
UBR4-207ENST00000425413 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
UBR4-207ENST00000425413 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
UBR4-207ENST00000425413 MDKP21741 143 aaPredicted RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 DLX1P56177 255 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 SPCS3P61009 180 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 B2MP61769 119 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 RPL31P62899 125 aaKnown RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 LYPD2Q6UXB3 125 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 OR4F5Q8NH21 305 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 OR4F4Q96R69 305 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 SSX3Q99909 188 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 TMEM204Q9BSN7 226 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 IDI2-AS1Q9NZ38 188 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 VAX2Q9UIW0 290 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 RAI1Q7Z5J4 1906 aaPredicted RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 PAGE4O60829 102 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 RAB7AP51149 207 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 CD81P60033 236 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 ADIRFQ15847 76 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 TMEM170AQ8WVE7 144 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 ZCCHC14Q8WYQ9 949 aaKnown RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 SMIM7Q9BQ49 75 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 ZNF251Q9BRH9 671 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 DYNLRB1Q9NP97 96 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 AURKAIP1Q9NWT8 199 aaPredicted RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 MIOXQ9UGB7 285 aa9.5□□□□□ -0.89
UBR4-207ENST00000425413 TET2Q6N021 2002 aaPredicted RBP9.5□□□□□ -0.89
UBR4-207ENST00000425413 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 TRGC2P03986 189 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 CR1LQ2VPA4 569 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 MIC13Q5XKP0 118 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 NECAP1Q8NC96 275 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 MS4A5Q9H3V2 200 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 SPTAN1Q13813 2472 aaKnown RBP9.49□□□□□ -0.89
UBR4-207ENST00000425413 GFRA3O60609 400 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 FCN3O75636 299 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 NUP37Q8NFH4 326 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 DDB2Q92466 427 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 ACTR3CQ9C0K3 210 aaPredicted RBP9.49□□□□□ -0.89
UBR4-207ENST00000425413 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 AKAP6Q13023 2319 aa9.49□□□□□ -0.89
UBR4-207ENST00000425413 MED13LQ71F56 2210 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CTXND1A0A1B0GTU2 59 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 NKX6-3A6NJ46 265 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 FAM90A27PA6NNH2 459 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 IFNA1P01562 189 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 C3orf36Q3SXR2 165 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 MOB3BQ86TA1 216 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 YPEL4Q96NS1 127 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 DOK5Q9P104 306 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 TRAV20A0A0B4J274 112 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 PLAUP00749 431 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 GRNP28799 593 aaKnown RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 VDAC2P45880 294 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 PSMB3P49720 205 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 GNB2P62879 340 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms