RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF430Q9H8G1 570 aaPredicted RBP12.36□□□□□ -0.43
BRAT1-202ENST00000421712 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 NUBP2Q9Y5Y2 271 aa12.36□□□□□ -0.43
BRAT1-202ENST00000421712 KBTBD11O94819 623 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 IGHG4P01861 327 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 EGR2P11161 476 aaPredicted RBP12.35□□□□□ -0.43
BRAT1-202ENST00000421712 CD40LGP29965 261 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 OR4F17Q8NGA8 305 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 TRIM63Q969Q1 353 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF355PQ9NSJ1 428 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 ZFP57Q9NU63 452 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 COMMD9Q9P000 198 aa12.35□□□□□ -0.43
BRAT1-202ENST00000421712 FOXA2Q9Y261 457 aaPredicted RBP12.35□□□□□ -0.43
BRAT1-202ENST00000421712 MSGN1A6NI15 193 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 KRASP01116 189 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
BRAT1-202ENST00000421712 SERPINE2P07093 398 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 CTSDP07339 412 aaPredicted RBP12.34□□□□□ -0.43
BRAT1-202ENST00000421712 APELAP0DMC3 54 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 RND3P61587 244 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
BRAT1-202ENST00000421712 ZNF45Q02386 682 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 CFHR3Q02985 330 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
BRAT1-202ENST00000421712 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 TREML4Q6UXN2 200 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
BRAT1-202ENST00000421712 OR5T1Q8NG75 326 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 OR4A5Q8NH83 315 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 SCGB3A2Q96PL1 93 aa12.34□□□□□ -0.43
BRAT1-202ENST00000421712 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-202ENST00000421712 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 PPIFP30405 207 aaKnown RBP12.33□□□□□ -0.44
BRAT1-202ENST00000421712 G6PCP35575 357 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-202ENST00000421712 BAK1Q16611 211 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 MINDY2Q8NBR6 621 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 KLHL30-AS1Q8NEE0 82 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 CASTOR1Q8WTX7 329 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 SRSF12Q8WXF0 261 aaKnown RBP12.33□□□□□ -0.44
BRAT1-202ENST00000421712 FYTTD1Q96QD9 318 aaKnown RBP12.33□□□□□ -0.44
BRAT1-202ENST00000421712 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 BET1LQ9NYM9 111 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 TNCP24821 2201 aa12.33□□□□□ -0.44
BRAT1-202ENST00000421712 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 PSMB8P28062 276 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 MAS1LP35410 378 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 RAB9AP51151 201 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 RPL8P62917 257 aaKnown RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 SSBP2P81877 361 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 OR5M8Q8NGP6 311 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 MRGPRFQ96AM1 343 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 TMEM68Q96MH6 324 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 MS4A10Q96PG2 267 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 SPIN2AQ99865 258 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 SPIN2BQ9BPZ2 258 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 KLK15Q9H2R5 256 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 FAM212BQ9NTI7 297 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-202ENST00000421712 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
BRAT1-202ENST00000421712 H0Y980 276 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 UPK2O00526 184 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 SNAPC5O75971 98 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 PF4P02776 101 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 HLA-GP17693 338 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 TRIM16LQ309B1 348 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 SP6Q3SY56 376 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 C10orf55Q5SWW7 151 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 C18orf65Q6ZTR6 163 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 COA4Q9NYJ1 87 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 GPR132Q9UNW8 380 aa12.31□□□□□ -0.44
BRAT1-202ENST00000421712 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 SOX15O60248 233 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 TPPP2P59282 170 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 RNF152Q8N8N0 203 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 DEDD2Q8WXF8 326 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 C5orf66Q9H5L9 145 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
BRAT1-202ENST00000421712 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms