RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 KCNAB3O43448 404 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 LY86O95711 162 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 IFNA17P01571 189 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 MSMBP08118 114 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 IAPPP10997 89 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 TAS2R30P59541 319 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 OR2B8PP59922 312 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 UBE2KP61086 200 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 VMA21Q3ZAQ7 101 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 SPNS3Q6ZMD2 512 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 PDZD9Q8IXQ8 264 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 CIB3Q96Q77 187 aaPredicted RBP9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 TBX15Q96SF7 602 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 QTRT1Q9BXR0 403 aaKnown RBP9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 MS4A7Q9GZW8 240 aaPredicted RBP9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 BET1LQ9NYM9 111 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 PSENENQ9NZ42 101 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 PRNDQ9UKY0 176 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 WSB1Q9Y6I7 421 aa9.4□□□□□ -0.9
SNRNP35-202ENST00000412157 MTORP42345 2549 aa9.4□□□□□ -0.91
SNRNP35-202ENST00000412157 ABCA2Q9BZC7 2435 aa9.4□□□□□ -0.91
SNRNP35-202ENST00000412157 IGHV3-72A0A0B4J1Y9 119 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 A0A1W2PPI3 338 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 C15orf61A6NNL5 157 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 B4DSR2 109 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 UPK2O00526 184 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 IFNA7P01567 189 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 LGALS7P47929 136 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 UBE2E1P51965 193 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 RELBQ01201 579 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 PAX8Q06710 450 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 Q5PR19 223 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 ZNF429Q86V71 674 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 STX12Q86Y82 276 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 TMEM252Q8N6L7 170 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 OR52E5Q8NH55 327 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 SMIM8Q96KF7 97 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 FKBP11Q9NYL4 201 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 FBXL17Q9UF56 701 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 FOXA2Q9Y261 457 aaPredicted RBP9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 CR1P17927 2039 aa9.39□□□□□ -0.91
SNRNP35-202ENST00000412157 NF1P21359 2839 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 TRAV20A0A0B4J274 112 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 H3BP45 60 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 KBTBD11O94819 623 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 SPDEFO95238 335 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 FGF2P09038 288 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 CD1BP29016 333 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 HOXA1P49639 335 aaPredicted RBP9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 SPCS3P61009 180 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 BAXQ07812 192 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 AARDQ4LEZ3 155 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 PUSL1Q8N0Z8 303 aaKnown RBP9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 ST8SIA2Q92186 375 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 TSNAXQ99598 290 aaKnown RBP9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 UBQLN2Q9UHD9 624 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 HILPDAQ9Y5L2 63 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 U3KQ87 197 aa9.38□□□□□ -0.91
SNRNP35-202ENST00000412157 BORCS7-ASMTA0A0B4J1R7 106 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 IGSF23A1L1A6 192 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TIMM23O14925 209 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 SCAF4O95104 1147 aaKnown RBP9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 GATA3P23771 443 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 PAX9P55771 341 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 RPP30P78346 268 aaKnown RBP9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 EXOSC2Q13868 293 aaKnown RBP9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 PRSS57Q6UWY2 283 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 LINC01356Q8N9X3 169 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 RNF5Q99942 180 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 HIPK2Q9H2X6 1198 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TMEM14BQ9NUH8 114 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TCF19Q9Y242 345 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 AUP1Q9Y679 476 aa9.37□□□□□ -0.91
SNRNP35-202ENST00000412157 TRAV40A0A0B4J280 105 aa9.36□□□□□ -0.91
SNRNP35-202ENST00000412157 SRRM4A7MD48 611 aaKnown RBP9.36□□□□□ -0.91
SNRNP35-202ENST00000412157 NPFFO15130 113 aa9.36□□□□□ -0.91
SNRNP35-202ENST00000412157 SLC25A17O43808 307 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms