RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 DBX1A6NMT0 343 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 TRIM77I1YAP6 450 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 UPK2O00526 184 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 CHST1O43916 411 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 GPR137BO60478 399 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 IGKV1-5P01602 117 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 AMY1AP04745 511 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 FGF2P09038 288 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 P0C879 139 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 PLGLAQ15195 96 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 TATDN3Q17R31 274 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 SSX9Q7RTT3 188 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 H2BFWTQ7Z2G1 175 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 PPP1R27Q86WC6 154 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 SLC35G3Q8N808 338 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 RRNAD1Q96FB5 475 aaKnown RBP9.79□□□□□ -0.84
LINC00339-201ENST00000404210 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
LINC00339-201ENST00000404210 FCN1O00602 326 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 KBTBD11O94819 623 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 MAS1LP35410 378 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 AKR1C2P52895 323 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 PRSS8Q16651 343 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 MMD2Q8IY49 270 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 GPR146Q96CH1 333 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 NPFFR1Q9GZQ6 430 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 RANBP3Q9H6Z4 567 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-201ENST00000404210 ZFHX3Q15911 3703 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 MAST4O15021 2626 aa9.78□□□□□ -0.84
LINC00339-201ENST00000404210 A0A0B4J293 547 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 SNAPC5O75971 98 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 IFNA21P01568 189 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 HLA-DRB1P01911 266 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 CRYBA1P05813 215 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 HOXB5P09067 269 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 SLC25A6P12236 298 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 HLA-GP17693 338 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 BLCAPP62952 87 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 RELBQ01201 579 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 Q6ZNX1 250 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 UXS1Q8NBZ7 420 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 OR4A16Q8NH70 328 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 RNASE11Q8TAA1 199 aaKnown RBP9.77□□□□□ -0.85
LINC00339-201ENST00000404210 CLCC1Q96S66 551 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 OR51J1Q9H342 316 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 ZNF430Q9H8G1 570 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-201ENST00000404210 FKBP11Q9NYL4 201 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 ALG5Q9Y673 324 aa9.77□□□□□ -0.85
LINC00339-201ENST00000404210 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 A0A1B0GU03 582 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 IGHG2P01859 326 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 RPL8P62917 257 aaKnown RBP9.76□□□□□ -0.85
LINC00339-201ENST00000404210 PJVKQ0ZLH3 352 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 GGNBP1Q5YKI7 109 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 Q6ZRM9 215 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 TPSG1Q9NRR2 321 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-201ENST00000404210 COA4Q9NYJ1 87 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 MXRA5Q9NR99 2828 aa9.76□□□□□ -0.85
LINC00339-201ENST00000404210 NSD1Q96L73 2696 aaPredicted RBP9.75□□□□□ -0.85
LINC00339-201ENST00000404210 MTORP42345 2549 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 IGHV7-81A0A0B4J1V7 117 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 ADAP1O75689 374 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 TSPAN9O75954 239 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 ACTL6BO94805 426 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 CA2P00918 260 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 CX3CL1P78423 397 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 SMCO1Q147U7 214 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 FXYD3Q14802 87 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 LURAP1LQ8IV03 231 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 FOXRED2Q8IWF2 684 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 Q8N2B8 174 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 CACFD1Q9UGQ2 172 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
LINC00339-201ENST00000404210 PLXNB1O43157 2135 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 TNCP24821 2201 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 SH2D7A6NKC9 451 aaPredicted RBP9.74□□□□□ -0.85
LINC00339-201ENST00000404210 C15orf61A6NNL5 157 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 KCNAB3O43448 404 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 SSNA1O43805 119 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 PITX3O75364 302 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 CNIH1O95406 144 aa9.74□□□□□ -0.85
LINC00339-201ENST00000404210 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
LINC00339-201ENST00000404210 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
LINC00339-201ENST00000404210 TNXAQ16473 311 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms